FC932605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_BACSU (GTP-binding protein typA/bipA homolog OS=Bacillus subtilis GN=typA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.208e-40 Identity = 91/224 (40.62%), Postives = 140/224 (62.50%), Query Frame = 2 Query: 11 SMMEKDFYLGRILTXXXXXXXXXXXDKVHGLRITDSGTEKIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMA-ETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDM 679 ++++ + Y+GRI +V +++ GT K +V K+ +G V I+ A AGD+++++GM ++G TV + LP + +D PT+ MTF VN+SP AGR+G ++T KI RL S+ +T++++ V P + + + V GRGEL L ILIENMRREG+EL VS P+V+ K +GV+ EP+E V I+V EEH G VME++ RK E++DM Sbjct: 212 ALLDYNDYVGRIGIGRVFRGTMKVGQQVSLMKL--DGTAK--SFRVTKIFGFQGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVDHQDPLPVLRIDEPTLQMTFVVNNSPFAGREGKYVTARKIEERLQSQLQTDVSLRVEPTASPDAWVVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCEPVERVQIDVPEEHTGSVMESMGARKGEMVDM 431
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_SYNY3 (GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain PCC 6803) GN=typA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 85/184 (46.20%), Postives = 117/184 (63.59%), Query Frame = 2 Query: 131 IEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPG-MAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDM 679 I +GKV KL+ +G + + A AG I++IAG +IG T+ + ALP I++D PT+ MTF VNDSP AG++G +T +I RL E ETN+A+ V G AE + V GRGEL LGILIE MRREG+E V+ P+V+Y+ NG EP+E + ++V E VG +E L R+ E+ DM Sbjct: 246 IAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQALPLIKVDEPTLQMTFSVNDSPFAGQEGKFVTSRQIRDRLNRELETNVALRVEDGESAEQFLVSGRGELHLGILIETMRREGYEFQVAQPQVIYREVNGQPCEPVEYLVLDVPEAAVGACIERLGQRRGEMQDM 429
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_HELPY (GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori GN=typA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.564e-37 Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 2 Query: 134 EEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 E G++ KL+ G I++A AGDI++IAG +G +V + L + L+ PT+S+ F VNDSPLAG +G H+T K+ RL+ E +TN+A+ ++V GRGELQ+ IL EN+RREGFE S+S P+V+ K ENGVK EP E + I+ ++ G ++E L RKAE+ M P+ R + Sbjct: 246 ENGRITKLIGFLGLARTEIENAYAGDIVAIAGFNAMDVGDSVVDPANPMPLDPMHLEEPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGEGKFKVSGRGELQITILAENLRREGFEFSISRPEVIIKEENGVKCEPFEHLVIDTPQDFSGAIIERLGKRKAEMKAMNPMSDGYTRLEF 439
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_SHIFL (GTP-binding protein typA/bipA OS=Shigella flexneri GN=typA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 86/197 (43.65%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 K KV K++ G + D A AGDI++I G+ + +I TV +T+ ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT++V E+H G VM+AL RK ++ +M P R +Y Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDY 441
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_HELPJ (GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori J99 GN=typA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 80/194 (41.24%), Postives = 118/194 (60.82%), Query Frame = 2 Query: 134 EEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGMAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 E G++ KL+ G I++A AGDI+++AG +G +V + L + L+ PT+S+ F VNDSPLAG +G H+T K+ RL+ E +TN+A+ ++V GRGELQ+ IL EN+RREGFE S+S P+V+ K ENGVK EP E + I+ ++ G ++E L RKAE+ M P+ R + Sbjct: 246 ENGRITKLIGFLGLARTEIENAYAGDIVALAGFNAMDVGDSVVDPTNPMPLDPMHLEEPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGEGKFKVSGRGELQITILAENLRREGFEFSISRPEVIIKEENGVKCEPFEHLVIDTPQDFSGAIIERLGKRKAEMKAMNPMSDGYTRLEF 439
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_HAEIN (GTP-binding protein typA/bipA homolog OS=Haemophilus influenzae GN=typA PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 88/195 (45.13%), Postives = 124/195 (63.59%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINV--IPGMAETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGR 706 K +G++ +++ G D A AGDI++I G+ + +I T+ + ALP++ +D PT++M F VN SP AG++G ++T +I RL E N+A+ V P E + V GRGEL L +LIENMRREG+EL+VS PKV+Y+ +G K EP E+VTI+V E+H G VMEAL RK EV DM +P GR Sbjct: 251 KTRQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINTVEALPSLTVDEPTVTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELHLSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGEVRDM--LPDGKGR 442
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_ECOLI (GTP-binding protein typA/BipA OS=Escherichia coli (strain K12) GN=typA PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 86/197 (43.65%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 K KV K++ G + D A AGDI++I G+ + +I TV +T+ ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT++V E+H G VM+AL RK ++ +M P R +Y Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDY 441
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_ECOL6 (GTP-binding protein typA/bipA OS=Escherichia coli O6 GN=typA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 86/197 (43.65%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 K KV K++ G + D A AGDI++I G+ + +I TV +T+ ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT++V E+H G VM+AL RK ++ +M P R +Y Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDY 441
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_ECO57 (GTP-binding protein typA/bipA OS=Escherichia coli O157:H7 GN=typA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 86/197 (43.65%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 K KV K++ G + D A AGDI++I G+ + +I TV +T+ ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT++V E+H G VM+AL RK ++ +M P R +Y Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDY 441
BLAST of FC932605 vs. ExPASy Swiss-Prot
Match: TYPA_ECO27 (GTP-binding protein typA/bipA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=typA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.373e-37 Identity = 86/197 (43.65%), Postives = 121/197 (61.42%), Query Frame = 2 Query: 128 KIEEGKVIKLMKKKGTGMVLIDSAGAGDIISIAGMTKPSIGHTVANTEVTTALPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGKIGARLMSEAETNLAINVIPGM-AETYEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTENGVKLEPIEEVTIEVNEEHVGLVMEALSHRKAEVMDMGPVPGSAGRTNY 715 K KV K++ G + D A AGDI++I G+ + +I TV +T+ ALP + +D PT+SM F VN SP G++G +T +I RL E N+A+ V A+ + V GRGEL L +LIENMRREGFEL+VS PKV+++ +G K EP E VT++V E+H G VM+AL RK ++ +M P R +Y Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDY 441 The following BLAST results are available for this feature:
BLAST of FC932605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932605 ID=FC932605; Name=FC932605; organism=Citrus clementina; type=EST; length=736bpback to top |