FC932640

Overview
NameFC932640
Unique NameFC932640
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15544 contig Ccv1_Contig15544:1..711. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.175e-86
Identity = 154/179 (86.03%), Postives = 169/179 (94.41%), Query Frame = 1
Query:  154 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            SVF  +V+APEDPILGVTVAYNKD SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQ L+ND++R+KEYLPIVGLV+FNKLSAKLILGADSPAI++NR+TTV+CLSGTGSLRVG EFLA+HYHQ TIYI QPTWGNHPK+FTLAGL+VKTYRYYDPATRGLNFQGLLEDL AA  G+IVLL
Sbjct:   47 SVFSHLVQAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLL 225          

HSP 2 Score: 22.3274 bits (46), Expect = 4.175e-86
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  226 HACAHNP 232          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 9.273e-86
Identity = 154/183 (84.15%), Postives = 169/183 (92.35%), Query Frame = 1
Query:  142 MDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            M S SVF  + +APEDPILGVTVAYNKD SPVK+NLGVGAYRTEEGKPLVLNVVR+AEQ+L+N+ SRVKEYLPI GL DFNKLSAKLI GADSPAI++NRV TVQCLSGTGSLRVG EFLARHYH+ TIYIPQPTWGNHPKVFTLAGL+V++YRYYDPATRGL+FQGLLEDL +APSGAIVLL
Sbjct:    1 MASSSVFAGLAQAPEDPILGVTVAYNKDPSPVKVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLL 183          

HSP 2 Score: 22.3274 bits (46), Expect = 9.273e-86
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  184 HACAHNP 190          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.058e-85
Identity = 153/179 (85.47%), Postives = 167/179 (93.30%), Query Frame = 1
Query:  154 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            SVF  +VRAPEDPILGVTVAY+KD SP KLNLGVGAYRTEEGKPLVLNVV+KAEQ+LVNDQSRVKEYLPIVGL DFNKLSAKLI GADSPAI++NRV TVQCLSGTGSLRVG EFLARHYH+ T+YIPQPTWGNHPK+FTLAGLSVKTYRYY+P TRGL+F+G+LEDL +AP GAIVLL
Sbjct:    3 SVFANVVRAPEDPILGVTVAYHKDQSPNKLNLGVGAYRTEEGKPLVLNVVKKAEQMLVNDQSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLL 181          

HSP 2 Score: 22.3274 bits (46), Expect = 2.058e-85
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  182 HACAHNP 188          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 9.289e-83
Identity = 151/180 (83.89%), Postives = 164/180 (91.11%), Query Frame = 1
Query:  151 ESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            +SVF  + RAPEDPILGVTVAYN D SPVK+NLGVGAYRTEEGKPLVL+VVRKAEQ LVND SRVKEY+PIVG+ DFNKLSAKLILGADSPAI ++RVTTVQCLSGTGSLRVGAEFL  HYHQ  IYIP+PTWGNHPKVF LAGLSV+ +RYYDPATRGL+F+GLLEDL AAPSGAIVLL
Sbjct:    2 DSVFSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLL 181          

HSP 2 Score: 22.3274 bits (46), Expect = 9.289e-83
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  182 HACAHNP 188          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 2.462e-80
Identity = 146/181 (80.66%), Postives = 163/181 (90.06%), Query Frame = 1
Query:  148 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            S+SVF  +VRAPEDPILGVTVAYNKD SP+KLNLGVGAYRTEEGKPLVL+VVR+ E+ L+ND SR KEY+PIVGL DFNKLSAKLI GADSPAI++NRVTTVQ LSGTGSLRVG EFLA+HYHQ  IY+P PTWGNH KVF LAGL+VKTYRYY PATRGL+FQGLLEDL +APSG++VLL
Sbjct:   14 SDSVFAHLVRAPEDPILGVTVAYNKDPSPIKLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLL 194          

HSP 2 Score: 22.3274 bits (46), Expect = 2.462e-80
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  195 HACAHNP 201          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 7.973e-65
Identity = 121/179 (67.60%), Postives = 143/179 (79.89%), Query Frame = 1
Query:  154 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            S+   ++ APEDP+L V  A   D SPVKLNL  G YRTEEGKPLVL+VVR+AEQ L ND    KEYLP+ GL +FNKLS KLILG DSPA+K+NRV T QCLSGTGSLRVGAEFLA H  +  I++P PTWGNHP++FTLAGLSV+ +RYYDP +RGL+F+G+LEDL AAP GAIV+L
Sbjct:    3 SILSSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLD--KEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVL 179          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 6.083e-51
Identity = 96/186 (51.61%), Postives = 133/186 (71.51%), Query Frame = 1
Query:  133 RNLMDSESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            R    + + +  + + PEDPILGV++AYNKDTSP K+NLGVGAYR E GKP VL+ V+KA++ +  + +   EY PIVG+  FN+L+A+L LG +   IK+ R+ TVQ +SGTG+LR+ A+F AR     T Y+P PTWGNH  +F  AG+ VK+Y YY+PAT GLNF+ + +D+ AAP G+I+LL
Sbjct:   19 RQFSTNTNWWANVQKGPEDPILGVSIAYNKDTSPSKINLGVGAYRDENGKPYVLDCVKKADKKIY-EANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILL 203          

HSP 2 Score: 22.3274 bits (46), Expect = 6.083e-51
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  204 HACAHNP 210          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.614e-49
Identity = 102/179 (56.98%), Postives = 127/179 (70.95%), Query Frame = 1
Query:  154 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            S F  I  AP DPILGV+ A+  DTS  KLNLGVGAYRTEE +P VL VV KAE L++ ++ + KEYL I GL  FNK +A+L+LGAD+PAIK  RV TVQ LSGTGSLR+GA  + R++    + I  PTWGNH  +F  A +    YRYYDP T GL+F+G++ED++AAP G  VLL
Sbjct:   52 SRFEGIPMAPPDPILGVSEAFRADTSDAKLNLGVGAYRTEELQPYVLKVVNKAENLML-ERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLL 229          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 3.365e-47
Identity = 95/179 (53.07%), Postives = 125/179 (69.83%), Query Frame = 1
Query:  154 SVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHYHQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            S F  I  AP DPILGV+ A+  DT+ +KLNLGVGAYRTEE +P VLNVV+KAE L++ ++   KEYLPI GL  FNK +A+L+ GA  P IK+ RV T+Q LSGTGSLR+ A  + R++    + I  PTWGNH  +F  A +    YRYYDP T GL+F+G++ D++ AP G+ +LL
Sbjct:   51 SRFEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLML-ERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILL 228          
BLAST of FC932640 vs. ExPASy Swiss-Prot
Match: AATM_CHICK (Aspartate aminotransferase, mitochondrial OS=Gallus gallus GN=GOT2 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.556e-45
Identity = 93/182 (51.10%), Postives = 121/182 (66.48%), Query Frame = 1
Query:  148 SESVFGKIVRAPEDPILGVTVAYNKDTSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQLLVNDQSRVKEYLPIVGLVDFNKLSAKLILGADSPAIKDNRVTTVQCLSGTGSLRVGAEFLARHY-HQLTIYIPQPTWGNHPKVFTLAGLSVKTYRYYDPATRGLNFQGLLEDLRAAPSGAIVLL 690
            + S +  +   P DPILGVT A+ +DT+  K+NLGVGAYR + GK  VLN VRKAE ++   +   KEYLPI GL DF + SA+L LG +S A K  R  TVQ +SGTGSLRVGA FL R +     +Y+P+P+WGNH  +F  AGL ++ YRYYDP T  L+F G +ED+   P  +I+LL
Sbjct:   22 ASSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKSYVLNCVRKAEAMIAAKKMD-KEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILL 202          

HSP 2 Score: 22.3274 bits (46), Expect = 1.556e-45
Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 3
Query:  690 HACAHNP 710
            HACAHNP
Sbjct:  203 HACAHNP 209          
The following BLAST results are available for this feature:
BLAST of FC932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AAT3_ARATH4.175e-8686.03Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ9.273e-8684.15Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AATC_DAUCA2.058e-8585.47Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT2_ARATH9.289e-8383.89Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT1_MEDSA2.462e-8080.66Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AAT4_ARATH7.973e-6567.60Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AATM_DICDI6.083e-5151.61Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATM_LUPAN1.614e-4956.98Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AAT5_ARATH3.365e-4753.07Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_CHICK1.556e-4551.10Aspartate aminotransferase, mitochondrial OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionC34210G08EF PostHarveN Citrus clementina cDNA clone C34210G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932640 ID=FC932640; Name=FC932640; organism=Citrus clementina; type=EST; length=710bp
GGCGCCCATTGTAACCGCCTACAGTTAAACTAACCAAACCACTCCGAGGC
CAATACTATATTAAACCCAAACATAATTTTCTCTTCACATTTTTTTCCCC
CACAAACTCTCTCATTTCATTGATTTCTTGAAAGAAATTTAATGGATTCT
GAATCAGTGTTTGGAAAGATTGTTCGTGCTCCTGAAGATCCCATTCTAGG
GGTCACTGTTGCTTATAACAAGGATACAAGCCCAGTCAAGTTGAACTTGG
GTGTTGGTGCTTACCGAACTGAGGAAGGGAAACCTCTGGTTCTGAATGTA
GTGAGAAAGGCAGAGCAGCTCTTAGTGAATGACCAGTCACGGGTCAAAGA
GTATCTTCCCATTGTTGGACTTGTGGATTTTAATAAATTGAGTGCAAAGC
TCATCCTTGGTGCTGACAGCCCTGCGATTAAAGACAACAGAGTGACCACC
GTTCAGTGCTTGTCTGGCACTGGTTCTTTGAGGGTTGGAGCTGAGTTTCT
GGCAAGGCATTATCACCAACTTACCATATATATTCCACAGCCAACATGGG
GAAACCATCCCAAAGTTTTCACTTTAGCAGGATTGTCTGTGAAGACCTAC
CGCTATTATGATCCAGCAACACGTGGGCTAAACTTCCAAGGCTTGCTGGA
GGATCTTAGGGCTGCACCATCCGGAGCTATAGTTCTTCTCATGCATGTGC
TCATAATCCA
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