BG791305

Overview
NameBG791305
Unique NameBG791305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length144
Libraries
Library NameType
Citrus sinensis flavedo cellscdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BG791305 vs. ExPASy Swiss-Prot
Match: XYLA_ARATH (Xylose isomerase OS=Arabidopsis thaliana GN=XYLA PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.299e-15
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 3 
Query:    3 IMLSVIKN*GFAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVAR 137
            +M+SVIKN G APGGFNFDAKLRRESTDVEDLFIAHI GMDT+AR
Sbjct:  362 VMMSVIKNGGIAPGGFNFDAKLRRESTDVEDLFIAHISGMDTMAR 406
[Close]
BLAST of BG791305 vs. ExPASy Swiss-Prot
Match: XYLA_HORVU (Xylose isomerase OS=Hordeum vulgare GN=XYLA PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.178e-14
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 IMLSVIKN*GFAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVAR 137
            IM SV+KN G APGGFNF AKLRRESTDVEDLFIAHI GMDT+AR
Sbjct:  364 IMSSVVKNDGLAPGGFNFYAKLRRESTDVEDLFIAHISGMDTMAR 408
The following BLAST results are available for this feature:
BLAST of BG791305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
XYLA_ARATH1.299e-1586.67Xylose isomerase OS=Arabidopsis thaliana GN=XYLA P... [more]
XYLA_HORVU4.178e-1484.44Xylose isomerase OS=Hordeum vulgare GN=XYLA PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCs-25e Citrus sinensis flavedo cells Citrus sinensis cDNA clone Cs-25e, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BG791305 ID=BG791305; Name=BG791305; organism=Citrus sinensis; type=EST; length=144bp
CGATTATGCTCAGTGTGATTAAAAATTGAGGTTTTGCACCTGGAGGATTC
AACTTTGATGCAAAATTACGAAGAGAGAGCACTGACGTTGAAGACTTGTT
CATTGCTCATATTGTTGGAATGGATACCGTTGCTCGTTGACTTC
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