BQ622942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_ARATH (Proteasome subunit beta type-4 OS=Arabidopsis thaliana GN=PBG1 PE=1 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 2.142e-60 Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 377 RRNKF+PLWN+LVLGGVKNG+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRDRSA+NKLQIAKITEEG T+SQPY+LKT+W F++F NPTAGA GSW Sbjct: 122 RRNKFNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus GN=Psmb4 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.735e-23 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 144 RRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus GN=PSMB4 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.735e-23 Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 144 RRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4) HSP 1 Score: 107.071 bits (266), Expect = 4.665e-23 Identity = 51/111 (45.95%), Postives = 76/111 (68.47%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 RR+K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 144 RRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNW 254
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus GN=Psmb4 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.357e-22 Identity = 50/111 (45.05%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 RR+K +PLWN+ V+GG G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ Q+A +TE+G I P + +T W Sbjct: 143 RRSKMNPLWNTKVIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 253
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis GN=psmb4 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.024e-22 Identity = 48/111 (43.24%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 RR+K +PLWN++V+GG NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL YRD + N+ +I +TE G + P + +T W Sbjct: 122 RRSKMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEITTVTESGVEVEGPLSSETNW 232
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_DICDI (Proteasome subunit beta type-4 OS=Dictyostelium discoideum GN=psmB4-1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.827e-20 Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTF 326 +RN+ +PLWN+LV+ G + G+ +LG V ++G ++D + TG+G+H+A P+LR E N++ E +L++ C+RVL YRD + K+QI+ EEG IS P L TF Sbjct: 135 QRNRGNPLWNTLVVMGYQGGKSFLGKVDLVGTCYKDDIITTGYGSHIALPLLRKARDENPNMNLEQAKQLIQDCLRVLFYRDARSSKKIQISVAGEEGIEISGPIELDTF 244
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_SCHPO (Probable proteasome subunit beta type-4 OS=Schizosaccharomyces pombe GN=SPBC577.10 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.007e-17 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGV--KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQ 347 RRNK DP WN L++ GV +N + Y+ + G + +ATGF HLA P+LR D W + LS E +++CMRVL YRD ++NK +A IT EG ++ + W F Q Sbjct: 134 RRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTYSAPAIATGFAMHLALPMLRKATDDDRW-KTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGIEFQTDQSVSSKWAFAEKQ 254
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_ENCCU (Probable proteasome subunit beta type-4 OS=Encephalitozoon cuniculi GN=PRE4 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.749e-13 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 3 Query: 6 RNKFDPLWNSLVLGGVKNG----------QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 329 R+K PL S+ +GG+ +K LG V+ +G + V TG G +L P LR+ E ++ E+ + L+E+ MR+L YRD +A N++Q+ + ++G IS PY +KT W Sbjct: 103 RSKISPLNLSVCVGGLNAASDGDRRTHTREKMLGCVNHLGNFYFSDVVCTGIGGYLVLPFLRNRVEGREEEIAREEAIGLVEEAMRILCYRDCNASNEIQVGYVDDQGVHISDPYQIKTNW 223
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Match: PSB4_DROME (Proteasome subunit beta type-4 OS=Drosophila melanogaster GN=Prosbeta7 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12 Identity = 38/114 (33.33%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 3 RRNKFDPLWNSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 335 RR++ +PL+ +V+GGV N G YL V + G ++ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD +++ + + G + P+ + W F Sbjct: 148 RRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTF 261 The following BLAST results are available for this feature:
BLAST of BQ622942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ622942 ID=BQ622942; Name=BQ622942; organism=Citrus sinensis; type=EST; length=497bpback to top |