BQ622946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.087e-69 Identity = 122/133 (91.73%), Postives = 127/133 (95.49%), Query Frame = 3 Query: 3 IGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 401 IGIIN P+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT + Sbjct: 119 IGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 5.394e-69 Identity = 123/135 (91.11%), Postives = 127/135 (94.07%), Query Frame = 3 Query: 3 IGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 407 IGIIN P+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN Sbjct: 118 IGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 3.513e-52 Identity = 100/134 (74.63%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 6 GIINAPQWYDA-GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 404 G++NAP+W GK YFASSST + + YVEIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG Sbjct: 99 GLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32 Identity = 70/139 (50.36%), Postives = 87/139 (62.59%), Query Frame = 3 Query: 3 IGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 401 IG++N P WY AG+ EYF ++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 130 IGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.812e-32 Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 3 Query: 3 IGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 401 IGI+N P WY AG+ EYF ++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 130 IGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.188e-21 Identity = 59/133 (44.36%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 36 AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 398 AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L + YPGG +FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 143 AGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.219e-20 Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 36 AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 398 AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L YPGG FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 145 AGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.013e-15 Identity = 53/138 (38.41%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 12 INAPQW--YDAGKAEYFASS------STLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 386 + A +W G+A Y + T+ IEF+ + E +R ++ +DP K+Y PGG F+PL F A +E K KE+ NGRLAMLAF+GF VQ + G GP ENL H++DPWHN I Sbjct: 113 VKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDPEKKKY---------PGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.907e-14 Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 3 Query: 12 INAPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 386 + A +W G+A Y + + T+ IEF+ +VE +R S+ +D K+Y PGG F+PL + A +E K KE+ NGRLA+LA +GF VQ + G GP ENL H++DPWHN I Sbjct: 114 VKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKDSEKKKY---------PGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.443e-13 Identity = 51/143 (35.66%), Postives = 67/143 (46.85%), Query Frame = 3 Query: 27 WYDAGKAEYFASSS-----------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGG-IFNPLNFAPTDEAKEK----ELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 407 W DAGK E SS TL IE ++ Y+E +R ++ + + YPGG F+PL A E + E+ + RLAM+AFLGF VQ TGKGP N H+SDP H TI+ T S + Sbjct: 165 WQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRL-----------------YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290 The following BLAST results are available for this feature:
BLAST of BQ622946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622946 ID=BQ622946; Name=BQ622946; organism=Citrus sinensis; type=EST; length=548bpback to top |