BQ622975

Overview
NameBQ622975
Unique NameBQ622975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:588..1056. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 2.044e-59
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  171 HGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 2.670e-59
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  171 HGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFK 284
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.487e-59
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHWIFWVGPF+GA LAALYHQ+VIRAIPFK
Sbjct:  170 HGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFK 283
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.952e-58
Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  170 HGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.952e-58
Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  WDDHW+FWVGPF+GA LAALYH VVIRAIPFK
Sbjct:  170 HGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFK 283
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 6.576e-58
Identity = 104/113 (92.04%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKD  W+DHWIFWVGPFVGA LAA+YHQV+IRAIPFK
Sbjct:  174 GYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.122e-57
Identity = 104/114 (91.23%), Postives = 109/114 (95.61%), Query Frame = 1 
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            HGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII+NKD  WDDHW+FWVGPF+GA LAALYH +VIRAIPFK
Sbjct:  170 HGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFK 283
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 1.913e-57
Identity = 104/113 (92.04%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPF+GA LAALYHQVVIRAIPFK
Sbjct:  175 GYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFK 287
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.913e-57
Identity = 102/113 (90.27%), Postives = 110/113 (97.35%), Query Frame = 1 
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W+DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  174 GYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 286
[Close]
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 2.499e-57
Identity = 102/113 (90.27%), Postives = 109/113 (96.46%), Query Frame = 1 
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVIRAIPFK 357
            GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+D  W DHWIFWVGPF+GA LAA+YHQV+IRAIPFK
Sbjct:  177 GYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFK 289
The following BLAST results are available for this feature:
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PIP14_ARATH2.044e-5994.74Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_ARATH2.670e-5993.86Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH3.487e-5994.74Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA2.952e-5892.98Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.952e-5892.98Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP11_ORYSJ6.576e-5892.04Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ARATH1.122e-5791.23Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP2_PEA1.913e-5792.04Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP12_MAIZE1.913e-5790.27Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE2.499e-5790.27Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00066 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00066 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622975 ID=BQ622975; Name=BQ622975; organism=Citrus sinensis; type=EST; length=469bp
CCAACGTCGTAGCCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
ATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGC
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