BQ622976

Overview
NameBQ622976
Unique NameBQ622976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1510..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 7.586e-52
Identity = 96/121 (79.34%), Postives = 110/121 (90.91%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAWL 365
            +QPTVFSDVKDDMLIA DEIFGPVQ+ILKFK+ D+VI RAN +R+GLAAGVFT++ DTA+ +MRALR GTVWINC+DV DA+IPFGGYK+SGIGREKGIYSLN YLQVKAVV  +KNPAWL
Sbjct:  414 IQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALRVGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLKNPAWL 534          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 2.882e-51
Identity = 93/121 (76.86%), Postives = 110/121 (90.91%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPVKNPAWL 365
            +QPTVFS+VKDDMLIAQDEIFGPVQSILKF + D+VI+RAN+T++GLAAGVFTK+ DTAN + RAL+AGTVW+NC+DVFDAAIPFGGYK+SG GREKGIYSLN YLQ+KAVV  +  PAW+
Sbjct:  418 IQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.176e-36
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 347
            +QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF A  PFGGYK+SG GRE G Y L AY +VK V   V
Sbjct:  400 IQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 514          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.176e-36
Identity = 75/119 (63.03%), Postives = 89/119 (74.79%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 353
            +QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF A  PFGGYK+SG GRE G Y L AY +VK V    P KN
Sbjct:  381 IQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTIKVPQKN 499          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_MOUSE (Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.536e-36
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 347
            +QPTVF DVKD M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF A  PFGGYK+SG GRE G Y L AY +VK V   V
Sbjct:  400 IQPTVFGDVKDGMTIAKEEIFGPVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 514          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.005e-36
Identity = 73/115 (63.48%), Postives = 87/115 (75.65%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 347
            +QPTVF DV+D M IA++EIFGPV  ILKFK  ++VI RAN +++GLAA VFTK  D AN + +AL+AGTVW+NCYDVF A  PFGGYKLSG GRE G Y L AY +VK V   V
Sbjct:  402 IQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVKV 516          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_BOVIN (Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.005e-36
Identity = 74/119 (62.18%), Postives = 89/119 (74.79%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 353
            +QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVW+NCYDVF A  PFGGYKLSG GRE G Y L AY +VK V    P KN
Sbjct:  401 IQPTVFGDVQDGMTIAKEEIFGPVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKLSGSGRELGEYGLQAYTEVKTVTVRVPQKN 519          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 4.468e-36
Identity = 74/119 (62.18%), Postives = 89/119 (74.79%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 353
            +QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWINCYDVF A  PFGGYK+SG GRE G Y L AY +VK V    P KN
Sbjct:  381 IQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWINCYDVFGAQSPFGGYKMSGNGRELGEYGLQAYTEVKTVTIKVPQKN 499          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 9.953e-36
Identity = 71/115 (61.74%), Postives = 86/115 (74.78%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQPV 347
            +QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN + +GLAA VFTK  D AN + +AL+AGTVW+NCYDVF A  PFGGYK+SG GRE G Y L AY +VK V   V
Sbjct:  398 IQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 512          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.300e-35
Identity = 69/111 (62.16%), Postives = 86/111 (77.48%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            +QPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FTK  D A T+  AL+AGTVW+NCY V  A +PFGG+K+SG GRE G Y L  Y +VK V
Sbjct:  377 IQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTV 487          
The following BLAST results are available for this feature:
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
AL2B7_ARATH7.586e-5279.34Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL2B4_ARATH2.882e-5176.86Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
ALDH2_RAT1.176e-3663.48Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_MESAU1.176e-3663.03Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]
ALDH2_MOUSE1.536e-3663.48Aldehyde dehydrogenase, mitochondrial OS=Mus muscu... [more]
ALDH2_PIG2.005e-3663.48Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]
ALDH2_BOVIN2.005e-3662.18Aldehyde dehydrogenase, mitochondrial OS=Bos tauru... [more]
ALDH2_HORSE4.468e-3662.18Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
ALDH2_HUMAN9.953e-3661.74Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
AL1A1_RABIT1.300e-3562.16Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00067 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00067 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622976 ID=BQ622976; Name=BQ622976; organism=Citrus sinensis; type=EST; length=485bp
TTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATGTTGATAGCA
CAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTTCAAGGAAAC
TGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTCTAGCTGCTG
GGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATGCGTGCACTG
AGAGCTGGGACTGTATGGATTAACTGCTACGACGTGTTTGATGCTGCTAT
TCCTTTCGGTGGGTACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTT
ACAGCCTTAACGCTTACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAG
AACCCAGCATGGCTCTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGT
GTTTATGAATAAGGACAGCGTGCAATATCAGCTTGTAATTATGGAGCAAA
TGGATAATTTACTTTAAAAGAACTTACTTTCTTTT
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