BQ622982

Overview
NameBQ622982
Unique NameBQ622982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ622982 vs. ExPASy Swiss-Prot
Match: FB60_ARATH (F-box protein At1g55000 OS=Arabidopsis thaliana GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 8.652e-51
Identity = 95/147 (64.63%), Postives = 115/147 (78.23%), Query Frame = 1 
Query:  106 ALACPDTLRLILSNLSVTDLARASCVCRAWSSVASDNNMIVLAFMAPWKLKEVVGMPLNGSFWRDNGIGKFAISHRLARGDTVASLAVKYSVQVMDIKRLNNMMSDHGIYSRERXXXXXXXXXXXXDGTCYIEFDTYAKREAAVLYL 546
            AL C DTL +I   L+V DLARASCVC+ W+SVA++++++V AF APW++KE+VG P + SFWRDNGI KFAISHR+ RGD+V SLAVKY+VQVMDIKRLNNMMSDHGIYSR+R            + TCY+E D YAKRE AVLYL
Sbjct:    2 ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASVSFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPISNPEILANTTCYVELDKYAKREVAVLYL 148
The following BLAST results are available for this feature:
BLAST of BQ622982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FB60_ARATH8.652e-5164.63F-box protein At1g55000 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00073 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00073 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622982 ID=BQ622982; Name=BQ622982; organism=Citrus sinensis; type=EST; length=547bp
CCGAAGAAGAGCTCCAAAACCATCTCCTGTCGTCCTCCTCATCCTCAGCC
TCAAGCTTCACCGACCCATCAACCGTAATCTCTCCAATGAACTCCCATCT
TCAGCGCCCTCGCCTGCCCCGATACGCTGCGTTTAATCCTGTCAAATCTC
AGCGTCACGGACCTCGCACGCGCCAGCTGCGTCTGCAGAGCGTGGAGCTC
CGTCGCGTCGGATAACAACATGATCGTCCTCGCATTCATGGCTCCATGGA
AGCTTAAAGAAGTTGTGGGAATGCCCTTGAATGGATCATTCTGGAGAGAT
AATGGGATTGGAAAGTTCGCCATTTCGCATCGTTTAGCGCGTGGAGATAC
GGTCGCTAGCCTCGCCGTTAAGTACTCCGTTCAGGTTATGGACATTAAAC
GGTTAAATAATATGATGAGTGATCATGGCATATATTCGAGGGAGAGGTTA
TTGATCCCTATAAGCAGTCCAGAACTTCTTATAGATGGAACATGCTACAT
AGAGTTTGACACCTATGCGAAAAGGGAAGCAGCAGTGCTGTATCTGC
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