BQ622985

Overview
NameBQ622985
Unique NameBQ622985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.416e-44
Identity = 80/109 (73.39%), Postives = 99/109 (90.83%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            DF++DTASGDH FD YMSLLK+AG YVLVGFPSE+K SPA+LN+G + ++GSVTGGTK TQ+ML++CAAHKIYP IE IPI+ +NEALER++K+D+KYRFVIDI+NSLK
Sbjct:  247 DFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSEIKISPANLNLGMRMLAGSVTGGTKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.257e-38
Identity = 73/109 (66.97%), Postives = 93/109 (85.32%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            +FIIDTASGDHPFD Y++LLKV GV  L+ FPSE+K  PA+LN+G +++SGSVTGGTKD QEM+ +CAA+KIYP IE I I+ +NEAL+RL+ RDV++RFVIDI+NS K
Sbjct:  246 NFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSEIKVHPANLNLGGRSLSGSVTGGTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENSFK 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.899e-37
Identity = 72/108 (66.67%), Postives = 90/108 (83.33%), Query Frame = 3
Query:    6 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            FIIDTASGDH FD Y+SLLKV GV VL+ FPSE+K  P +LN+ A++++GSVTGGTKD QEM+ +CAA+ +YP IE I I+ VNEAL+RLI RDV++RFVIDI+NS K
Sbjct:  247 FIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSEIKVHPENLNLAARSLAGSVTGGTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENSFK 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.324e-23
Identity = 58/109 (53.21%), Postives = 71/109 (65.14%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            DFIIDT S +H      SLLKV G  V +G P +    P  SL +G K V GS  GG K+TQEMLE+CA HKI   IE I + ++N A++RL K DV+YRFVID+ NSL
Sbjct:  245 DFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.263e-22
Identity = 57/111 (51.35%), Postives = 73/111 (65.77%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGF---PSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            DFIIDT S +H      SLLKV+G  V +G    P ++   P  L +G K V GS  GG K+TQEMLE+CA HKI   IE I + ++N A++RL+K DV+YRFVID+ NSL
Sbjct:  244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFP--LVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    9 IIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            IIDT S  HP    + LLKV G  V+VG P +    P   L +G K ++GS  GG K+TQEML++ A H I   +E IP++ VN A+ERL+K DV+YRFVID+ N++K
Sbjct:  228 IIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIK 335          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            D IIDT S DH     + LLK  G  VL+G     ++  P  L +G K V G++ GG K+TQEM+++   H + P+IE +P++ VN A++RL K DVKYRFVID+ N+LK
Sbjct:  251 DGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLK 360          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.307e-21
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            D IIDT S  HP    +SLLK  G  ++VG P +    P   L  G +T++GS  GG K+TQEM+++ A + I   +E IPI+ +N A++RL+K DVKYRFVID++ SLK
Sbjct:  249 DGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.053e-21
Identity = 55/110 (50.00%), Postives = 70/110 (63.64%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            D IIDT S  HP    + LL   G  V+VG P +    P   L +G K V+GS  GG K+TQEM+++ A H I   IE IPI+ +N A+ERL+K DV+YRFVIDI N+LK
Sbjct:  247 DGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.182e-20
Identity = 53/109 (48.62%), Postives = 68/109 (62.39%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            D+IIDT S  H     + LLKV G  + +G P +    P   L +G K V GS  GG K+TQEML++CA H I   IE I ++ +N A+ERL K DV+YRFVID+ NSL
Sbjct:  249 DYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357          
The following BLAST results are available for this feature:
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH1_ARATH3.416e-4473.39Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
CADH1_ORYSJ1.257e-3866.97Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH4_ORYSJ6.899e-3766.67Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH2_ARATH3.324e-2353.21Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ARATH1.263e-2251.35Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
MTDH_PETCR3.111e-2149.07Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH3_STYHU4.064e-2146.36Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
GEDH1_OCIBA5.307e-2147.27Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_FRAAN9.053e-2150.00Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH9_ARATH1.182e-2048.62Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00076 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00076 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622985 ID=BQ622985; Name=BQ622985; organism=Citrus sinensis; type=EST; length=616bp
TGGATTTCATCATCGACACAGCATCTGGTGATCATCCATTTGATGCGTAC
ATGTCACTGTTGAAGGTTGCTGGCGTTTATGTCCTAGTAGGATTTCCCAG
CGAAGTTAAATTTAGTCCCGCTAGTCTCAATATTGGTGCAAAAACTGTTA
GCGGTAGTGTAACAGGTGGTACCAAGGACACGCAAGAAATGTTGGAGTAT
TGTGCTGCTCATAAGATTTACCCGCAGATAGAAACAATTCCAATTGAGAA
TGTGAATGAAGCTCTTGAGAGGCTGATAAAGAGGGATGTAAAGTATCGAT
TTGTGATTGATATTCAGAACTCCTTGAAATAACATGGAGGCCAACCTCAC
TTTATAGCCACATATTGGAGAAGAGAGATCATATCCTTGTTCTCTGATTG
GCGATTCTTGATACAATAAACCTCTAAATCCTGCTAGTCATGCTTATGCT
GATAATTTTATGCTAATTAAGCATCACTACTTGTTCTTTCCTTTCTTAGT
TTTTGATTGTTTTGGGGAGACAATATGTTTAAGTACATATCTTTTACCTT
GAAGACAATGTCTTTCAAATAATCTTTAAGTAGAATAAATTTGAGTAAAA
AAAAAAAAAAAAAAAA
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