BQ623018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_DICDI (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=trappc5 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.260e-44 Identity = 77/128 (60.16%), Postives = 107/128 (83.59%), Query Frame = 3 Query: 24 NVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 N++D+PLSKGK E+++S+FAFLFSE++QY Q ++ ELE++L D GY++G R+LELLC R+K ++RET+LLGILSF+H+TVWK LFGK ADSLEK TE +DEYMIS+ ++VN+FIS+PK + + N Sbjct: 7 NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLCVREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISLPKHLSSLN 134 HSP 2 Score: 31.187 bits (69), Expect = 1.260e-44 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 425 AGIVRGVLDSAGFPAVVTAHFV 490 AGI+ G+L SA FPA VTAH V Sbjct: 140 AGIIEGILCSAEFPARVTAHNV 161
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TRS31_SCHPO (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe GN=trs31 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.594e-34 Identity = 66/129 (51.16%), Postives = 95/129 (73.64%), Query Frame = 3 Query: 24 NVLDKPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 +V ++ L+K + +V+LS+FAF+FSEL+Q Q+QV I E E +L + GY VG +++EL+ R++ +RETR+LGIL ++HS+VWK LFGK ADSLEK E DEYMI + L+N+FIS+PK+M N Sbjct: 27 SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELVVWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFISVPKEMNQLN 155 HSP 2 Score: 31.9574 bits (71), Expect = 3.594e-34 Identity = 14/23 (60.87%), Postives = 16/23 (69.57%), Query Frame = 2 Query: 425 AGIVRGVLDSAGFPAVVTAHFVP 493 AGI+ G LDSA FP +AH VP Sbjct: 161 AGIIEGFLDSAQFPCKASAHSVP 183
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_HUMAN (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.471e-29 Identity = 67/129 (51.94%), Postives = 91/129 (70.54%), Query Frame = 3 Query: 21 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T N Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLN 138
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_CHICK (Trafficking protein particle complex subunit 5 OS=Gallus gallus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.921e-29 Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 21 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 S +L++PL + + EVSLSAFA LF ELVQY Q +V ++AEL+ +L G+ VG R+L+ L R++G RRET++L +L FV VW+ LFGK AD LE+ + + Y + E+E LVN FIS+P++ T N Sbjct: 10 SPLLERPLGRPRGEVSLSAFALLFCELVQYCQRRVYSVAELQSKLAQLGHQVGLRLLDPLVSRERGGRRETKVLSVLLFVKGPVWRALFGKEADKLEQANDDDKTYYVIEREPLVNTFISVPRENSTLN 138
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_BOVIN (Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.921e-29 Identity = 67/129 (51.94%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 21 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 S +L++ L++ + EVSLSAFA LFSELVQ+ Q++V +AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T N Sbjct: 10 SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLN 138
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_MOUSE (Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.277e-29 Identity = 67/129 (51.94%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 21 SNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 S +L++ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL G VGARVL+ L R+KG RRET++LG L FV VWK LFGK AD LE+ + + I E+E L+N +IS+PK+ T N Sbjct: 10 SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYISVPKENSTLN 138
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAFA (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.640e-19 Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 30 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 ++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L +++K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PKD G N Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYKNK-VKRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPKDYGNIN 131 HSP 2 Score: 26.1794 bits (56), Expect = 1.640e-19 Identity = 17/35 (48.57%), Postives = 20/35 (57.14%), Query Frame = 2 Query: 386 KRYGDI*FVGHLFAGIVRGVLDSAGFPAVVTAHFV 490 K YG+I AGIV G L S+ F A VTAH + Sbjct: 125 KDYGNINCAAFA-AGIVEGFLCSSEFQADVTAHTI 158
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Match: TPPC5_PLAF7 (Trafficking protein particle complex subunit 5 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0358 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.640e-19 Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 3 Query: 30 LDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFN 407 ++K L++ KQ+VSLSAF+ LFSE+VQY + +E L + G VG ++ E L +++K +R ++ IL+F+ VWK LF +D L K + EYMI +K +L+N+FI++PKD G N Sbjct: 8 IEKELNRIKQDVSLSAFSILFSEMVQYCLYKSKRGYRIEDCLHEMGLRVGYKLNEYLTYKNK-VKRSINIINILTFISKHVWKYLFQHSSDLL-KSQDSIYEYMICDKNILLNKFINVPKDYGNIN 131 HSP 2 Score: 26.1794 bits (56), Expect = 1.640e-19 Identity = 17/35 (48.57%), Postives = 20/35 (57.14%), Query Frame = 2 Query: 386 KRYGDI*FVGHLFAGIVRGVLDSAGFPAVVTAHFV 490 K YG+I AGIV G L S+ F A VTAH + Sbjct: 125 KDYGNINCAAFA-AGIVEGFLCSSEFQADVTAHTI 158 The following BLAST results are available for this feature:
BLAST of BQ623018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623018 ID=BQ623018; Name=BQ623018; organism=Citrus sinensis; type=EST; length=494bpback to top |