BQ623075

Overview
NameBQ623075
Unique NameBQ623075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:282..906. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 1.585e-76
Identity = 145/192 (75.52%), Postives = 156/192 (81.25%), Query Frame = 1
Query:   55 VAAAKVEQITAQLQT--PSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            VAAAKVEQITA LQT   SD KAFD VE IK GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSFP DGNNSTDFIEDWVKI +PAKSK ++E GD  F DQC  CE+EAV VSL+ LLT
Sbjct:  103 VAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLT 294          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.136e-74
Identity = 138/192 (71.88%), Postives = 153/192 (79.69%), Query Frame = 1
Query:   58 AAAKVEQITAQLQTPSDTKAF---DSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            AA KVEQITAQL T S +      ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIKGL+SFPFDG  STDFIE+WVKIG+PAK+K   +HGD PF + CT+CEKEAV  SL  LLT
Sbjct:   95 AAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLT 286          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.484e-74
Identity = 137/191 (71.73%), Postives = 154/191 (80.63%), Query Frame = 1
Query:   52 PVAAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            P+AAA+V+QITA+LQ+   +K FD VE +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIKGLMS P DG+ ST FIEDWVKIG+PAK+K   EH DK F DQCT CEKEAV VSL  LLT
Sbjct:   89 PIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLT 279          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 277.715 bits (709), Expect = 3.306e-74
Identity = 139/192 (72.40%), Postives = 156/192 (81.25%), Query Frame = 1
Query:   55 VAAAKVEQITAQLQ--TPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            VAAAKV++ITA+LQ  + SD+K+FD VERIK+GF+ FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIKGLMSFP DGNNSTDFIEDWVKI +PAKSK L E     F DQC  CE+EAV VSL+ LLT
Sbjct:   26 VAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLT 217          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.877e-69
Identity = 129/191 (67.54%), Postives = 144/191 (75.39%), Query Frame = 1
Query:   52 PVAAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSK + EH      DQC  CEKEAV VSL  LLT
Sbjct:   98 PVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLT 288          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.877e-69
Identity = 129/191 (67.54%), Postives = 144/191 (75.39%), Query Frame = 1
Query:   52 PVAAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSK + EH      DQC  CEKEAV VSL  LLT
Sbjct:   98 PVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLT 288          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 5.461e-69
Identity = 128/191 (67.02%), Postives = 143/191 (74.87%), Query Frame = 1
Query:   52 PVAAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NP LY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSK + EH      DQC  CEKEAV VSL  LLT
Sbjct:   97 PVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLT 287          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 5.461e-69
Identity = 128/191 (67.02%), Postives = 143/191 (74.87%), Query Frame = 1
Query:   52 PVAAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            PVAA +++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIKGLM+FP +G +STDFIEDWVK+ +PAKSK + EH      DQC  CEKEAV VSL  LLT
Sbjct:   98 PVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLT 288          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 2.710e-68
Identity = 128/189 (67.72%), Postives = 147/189 (77.78%), Query Frame = 1
Query:   58 AAAKVEQITAQLQTPSDTKAFDSVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            AA+KV QIT++L       A   V+RIK+GFI FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIKGLMSFP  G  +TDFIEDWVKI +PAK K L EHG+  F +QCT+CEKEAV VSL  LLT
Sbjct:   89 AASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLT 277          
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.201e-53
Identity = 101/148 (68.24%), Postives = 111/148 (75.00%), Query Frame = 1
Query:  181 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKGLTEHGDKPFGDQCTYCEKEAVIVSLSTLLT 624
            NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIKGLMS P DG  ++DFIE WVK+G+PAKSK      +  F D CT CEKEAV VSL  LLT
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLT 148          
The following BLAST results are available for this feature:
BLAST of BQ623075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_ARATH1.585e-7675.52Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHC_PEA1.136e-7471.88Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_TOBAC1.484e-7471.73Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAH2_ARATH3.306e-7472.40Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHX_FLABR1.877e-6967.54Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI1.877e-6967.54Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLAPR5.461e-6967.02Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI5.461e-6967.02Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHC_SPIOL2.710e-6867.72Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_FLALI4.201e-5368.24Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00166 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00166 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623075 ID=BQ623075; Name=BQ623075; organism=Citrus sinensis; type=EST; length=625bp
GAAGCCATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGACTTGAA
ACCTGTTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTACAGACTC
CATCTGACACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGACGGCTTC
ATTCACTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTACTCTGA
GCTTGCCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCTCAGACT
CCAGGGTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAAGCTTTC
GTGGTTCGCAATGTTGCTAACATTGTTCCACCCTATGACCAGACTAAGTA
TGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCAAGGTTT
CAAACATTGTGGTTATTGGGCACAGCGCCTGTGGCGGCATCAAAGGACTC
ATGTCTTTCCCATTTGATGGAAACAACTCCACCGATTTCATTGAAGACTG
GGTGAAAATTGGCATCCCTGCCAAGTCTAAGGGGTTAACAGAGCATGGTG
ACAAGCCTTTTGGAGACCAATGCACATACTGTGAAAAGGAGGCGGTGATT
GTGTCCCTCAGTACTCTGCTCACGT
back to top