BQ623078

Overview
NameBQ623078
Unique NameBQ623078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7145 contig Csv1_Contig7145:71..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 150/227 (66.08%), Postives = 167/227 (73.57%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQS-KESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE---------------TAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            M+ KETELCLGLPGG    +  A +          NKRGF ET  +DLKLNLQS K+  VDLN N        K   KDP+KP A KAQVVGWPPVR+YRKN MA                T AFVKV MDGAPYLRKVDLK Y SY++LSDALAKMFSSFTMG+YG+QGMIDFMNESK+MDLLNSS+YVP+YEDKDGDWMLVGDVPW MFV+SCKR+RIMKGSEA+
Sbjct:    1 MNLKETELCLGLPGGTETVESPAKS-------GVGNKRGFSET--VDLKLNLQSNKQGHVDLNTN---GAPKEKTFLKDPSKPPA-KAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAI 214          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.924e-72
Identity = 153/239 (64.02%), Postives = 168/239 (70.29%), Query Frame = 3
Query:   54 IGLKMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQS-KESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET-----------------------AAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            IG  M+ K TELCLGLPGG       A A+E        +KRGF ET  +DL LNLQS KE SVDL      P    K   KDP+KP A KAQVVGWPPVR+YRKN M +                        A  VKV MDGAPYLRKVDLK YKSYQ+LSDALAKMFSSFTMGNYG+QGMIDFMNESKLM+LLNSS+YVP+YEDKDGDWMLVGDVPWEMFV+SCKR+RIMKGSEA+
Sbjct:    2 IGQLMNLKATELCLGLPGG-------AEAVESPAKSAVGSKRGFSET--VDLMLNLQSNKEGSVDLKNVSAVP--KEKTTLKDPSKPPA-KAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAV 228          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 2.398e-66
Identity = 135/226 (59.73%), Postives = 162/226 (71.68%), Query Frame = 3
Query:   60 LKMDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHD---KDPAKPSANKAQVVGWPPVRSYRKNAMA---------ETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQ-GMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            ++++ +ETELCLGLPGG             T  P   NKRGF ET  +DLKLNL ++ ++ + +        ++K      KDPAKP A KAQVVGWPPVRSYRKN M          E AAFVKV MDGAPYLRK+DL+ YKSY ELS+AL+ MFSSFTMG +G + GMIDFMNE KLMDL+NS DYVP+YEDKDGDWMLVGDVPW MFVD+CKR+R+MKGS+A+
Sbjct:    5 VELNLRETELCLGLPGGD------------TVAPVTGNKRGFSET--VDLKLNLNNEPANKEGSTTHDVVTFDSKEKSACPKDPAKPPA-KAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAI 215          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.906e-65
Identity = 140/240 (58.33%), Postives = 155/240 (64.58%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCET---------AVIDLKLNLQSKESSV------DLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMA--------------ETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            M F+ETEL LGLPG G  ++                KRGF ET           +DL LNL SKE++       D  +  K  P        DPAKP A K QVVGWPPVRS+RKN +A                A+FVKV MDGAPYLRKVDLK YKSY+ELSD+L KMFSSFT GN  SQGM DFMNESKL DLLNSSDYVPTYEDKDGDWMLVGDVPWEMFV+SCKR+RIMKG EA+
Sbjct:    1 MGFEETELRLGLPGNGGTEE------------VLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTAAAAADPTDKHKTLPKEKTLLPADPAKPPA-KTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAI 227          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.481e-63
Identity = 143/244 (58.61%), Postives = 161/244 (65.98%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKE----SSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMA-----------------------------ETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            ++F+ TEL LGLPGG  N   E A        K + KRGF ET  +DLKLNL S      S VDL EN K          +   KP A KAQVVGWPPVRS+RKN M+                              T A+VKV MDGAPYLRK+DLK YK+YQ+LS+AL+KMFSSFT+GNYG QGM DFMNESKL+DLLN SDYVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEA+
Sbjct:    2 INFEATELRLGLPGG--NHGGEMAG-------KNNGKRGFSET--VDLKLNLSSTAMDSVSKVDL-ENMK----------EKVVKPPA-KAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAI 222          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.153e-60
Identity = 139/265 (52.45%), Postives = 162/265 (61.13%), Query Frame = 3
Query:   72 FKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNK----------NHDK-------------------------DPAKPSANKAQVVGWPPVRSYRKNAMA---------------------ETAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            F+ TEL LGLPGGG +    AAA        +S KRGF ET  IDLKL L+   ++VD +++ +   ++++          N D                          DP KP A KAQVVGWPPVRSYRKN +A                       AAFVKV MDGAPYLRKVDLK YKSY ELS AL KMFSSFT+GN GS G ++ MNESK+ DLLN S+YVPTYEDKDGDWMLVGDVPWEMFV+SCKR+RIMKGSEA+
Sbjct:    7 FEATELRLGLPGGGGDGDAAAAAAR-----SSSGKRGFAET--IDLKLKLEPAAAAVDDDDDKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHG-VNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAI 263          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.277e-51
Identity = 125/237 (52.74%), Postives = 145/237 (61.18%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQ---------------------SKESSVDLNENFKNPPSNNK--NHDKDPAKPSANKAQVVGWPPVRSYRKNAMAE---TAAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMIDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            + F ETEL LGLPG G     E AA       ++S KRGF ET  IDLKL LQ                     +  ++ D   + K   S +     + DP KP A KAQVVGWPPVRS+RKN +AE    AA VKV MDGAPYLRK+D+  YKSY ELS A   MF+SFT+G  GS   +   N  KL D L   +YVPTYEDKDGDWMLVGDVPWEMFV+SCKR+RIMKGSEA+
Sbjct:    4 LGFDETELRLGLPGAG-----ELAA-------RSSGKRGFAET--IDLKLKLQPAAPAAVSGEEGAQEDKEDADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCKAAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESN--KLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAI 221          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.154e-50
Identity = 116/262 (44.27%), Postives = 150/262 (57.25%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNN------------KKDEAAALELTPTPK-----------ASNKRGFCETA--VIDLKLNLQSKES----------SVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET--------------AAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMI--DFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            +  K TEL LGLPG  +             K DE     L P+             + NKRGF +T     + K ++ ++++          SV   +  +N P    +   + + P A KAQ+VGWPPVRSYRKN +A T              A FVKV MDGAPYLRKVDL++Y +Y ELS AL KMF++FT+G  GS G    D ++E+KL DLLN  DYV TYEDKDGDWMLVGDVPWEMF+D CK+++IMKG +A+
Sbjct:   61 ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPLLPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSSVYTEKNWMFPEAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAI 322          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.945e-48
Identity = 116/254 (45.67%), Postives = 147/254 (57.87%), Query Frame = 3
Query:   66 MDFKETELCLGLPGGGNNKKDEAAALELTPT--PKASNKRGFCE---------------TAVIDLKLNLQSKESSV-DLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAETAA-----------------------FVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMI--DFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            ++FK TEL LGLPG  + ++ ++  L L  +  P +  KR F +               TA  D+      + S V D        P+      K  A   A+KAQVVGWPP+RS+RKN+MA + +                       +VKV M+GAPYLRK+DLKTYKSY ELS AL KMFS FT+G +GS G    D +NES+L DLL  S+YV TYEDKD DWMLVGDVPWEMF+ SCK++RIMK SEA+
Sbjct:   38 LNFKATELRLGLPGSESPERVDSRFLALNKSSCPVSGAKRVFSDAINDSNKWVFSPGSTTATGDVGSGSGPRTSVVKDGKSTTFTKPAVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAI 291          
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.019e-46
Identity = 110/235 (46.81%), Postives = 138/235 (58.72%), Query Frame = 3
Query:   81 TELCLGLPG--------GGNNKKDEAAALELTPTPKASNKRGFCETAVIDLKLNLQSKESSVDLNENFKNPPSNNKNHDKDPAKPSANKAQVVGWPPVRSYRKNAMAET-------------------AAFVKVCMDGAPYLRKVDLKTYKSYQELSDALAKMFSSFTMGNYGSQGMI--DFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRMRIMKGSEAL 698
            TEL LGLPG        GG     +AA L L   PK   KRGF + A++      + + +     +         +  +K  A+  A KAQVVGWPP+RSYRKN MA +                     +VKV MDGAPYLRKVDLK YK+Y+ELS AL KMFS FT+G+  S G    D +++ +LMDL N ++ V TYEDKD DWMLVGDVPW MF DSC+R+RIMKGS+A+
Sbjct:   22 TELRLGLPGTAEEAESEGGGGGGTDAAPLTLELLPKGGAKRGFAD-AIVGGPAGQRREAAG---GKAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAV 252          
The following BLAST results are available for this feature:
BLAST of BQ623078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
IAA14_ARATH2.645e-7366.08Auxin-responsive protein IAA14 OS=Arabidopsis thal... [more]
IAA7_ARATH2.924e-7264.02Auxin-responsive protein IAA7 OS=Arabidopsis thali... [more]
IAA17_ARATH2.398e-6659.73Auxin-responsive protein IAA17 OS=Arabidopsis thal... [more]
AUX28_SOYBN5.906e-6558.33Auxin-induced protein AUX28 OS=Glycine max GN=AUX2... [more]
IAA16_ARATH2.481e-6358.61Auxin-responsive protein IAA16 OS=Arabidopsis thal... [more]
IAA30_ORYSJ1.153e-6052.45Auxin-responsive protein IAA30 OS=Oryza sativa sub... [more]
IAA11_ORYSJ1.277e-5152.74Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]
IAA9_ARATH9.154e-5044.27Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
IAA27_ARATH2.945e-4845.67Auxin-responsive protein IAA27 OS=Arabidopsis thal... [more]
IAA21_ORYSJ8.019e-4646.81Auxin-responsive protein IAA21 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00169 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00169 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623078 ID=BQ623078; Name=BQ623078; organism=Citrus sinensis; type=EST; length=698bp
TGCCGGAAAAAGAAAATCTGTAAAGGAGTTGTTTGATAATTTGAATGGAA
GCTATTGGCCTGAAAATGGACTTCAAAGAGACTGAACTTTGCCTTGGATT
GCCCGGCGGTGGCAACAACAAAAAAGATGAAGCTGCTGCGTTAGAATTAA
CTCCAACTCCAAAGGCTAGCAACAAAAGAGGCTTCTGTGAGACTGCCGTA
ATTGATTTGAAACTCAATCTTCAGTCTAAGGAATCGTCAGTGGATCTGAA
TGAAAATTTCAAGAATCCTCCTTCCAACAACAAGAATCATGATAAGGATC
CCGCAAAGCCATCCGCCAATAAGGCACAAGTTGTGGGGTGGCCACCAGTG
CGATCCTATAGGAAGAATGCTATGGCTGAAACGGCAGCATTTGTGAAGGT
TTGCATGGACGGGGCTCCATATCTTCGCAAAGTGGATTTGAAGACGTATA
AGAGTTACCAAGAGCTTTCTGATGCATTGGCCAAGATGTTCAGTTCCTTC
ACCATGGGTAATTATGGATCACAAGGAATGATTGATTTTATGAACGAGAG
CAAGTTGATGGATCTTTTAAACAGCTCTGATTATGTGCCAACCTATGAAG
ACAAGGATGGCGACTGGATGCTCGTGGGTGATGTTCCTTGGGAGATGTTT
GTTGATTCATGCAAGCGTATGCGCATAATGAAAGGGTCAGAAGCATTG
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