BQ623082

Overview
NameBQ623082
Unique NameBQ623082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10350 contig Csv1_Contig10350:29..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP7_ARATH (Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana GN=UBP7 PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 8.520e-71
Identity = 115/144 (79.86%), Postives = 129/144 (89.58%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDV 495
            MLTVSVKWQK+VF ++EIDTSQ P+VFK QLYDL+GVPPERQKIMVKGGLLKDD+DWS LG+K GQ+LMMMGTADEIVKAPEKGPVF+EDLPEE+Q  +LG+SAGL NLGNTCYMNST+QCL SVPELKS L  Y QS R+ DV
Sbjct:    1 MLTVSVKWQKKVFESIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLKNGQKLMMMGTADEIVKAPEKGPVFMEDLPEEQQAANLGYSAGLVNLGNTCYMNSTMQCLISVPELKSELSNY-QSARTKDV 143          

HSP 2 Score: 52.7582 bits (125), Expect = 8.520e-71
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 2
Query:  497 DQSSHMLTVATSKLFNDLDKSGKPVAPMQFWM 592
            DQ+SHMLTVAT +LF++LDKS K VAPM FWM
Sbjct:  144 DQTSHMLTVATRELFSELDKSVKAVAPMPFWM 175          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP6_ARATH (Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana GN=UBP6 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.206e-66
Identity = 111/144 (77.08%), Postives = 120/144 (83.33%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDV 495
            M TVSVKWQK+V   +EID S  PYVFK QLYDLTGVPPERQKIMVKGGLLKDD DW+ +GVK GQ+LMMMGTADEIVKAPEK  VF EDLPEE    +LG+SAGL NLGNTCYMNST+QCL SVPELKSAL  YS + RSNDV
Sbjct:    1 MPTVSVKWQKKVLDGIEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDGDWAAIGVKDGQKLMMMGTADEIVKAPEKAIVFAEDLPEEALATNLGYSAGLVNLGNTCYMNSTVQCLKSVPELKSALSNYSLAARSNDV 144          

HSP 2 Score: 48.1358 bits (113), Expect = 1.206e-66
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 2
Query:  497 DQSSHMLTVATSKLFNDLDKSGKPVAPMQFWM 592
            DQ+SHMLTVAT +LF +LD+S   V+P QFWM
Sbjct:  145 DQTSHMLTVATRELFGELDRSVNAVSPSQFWM 176          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_PANTR (Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes GN=USP14 PE=3 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 7.650e-38
Identity = 76/151 (50.33%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSKLSYV 516
            + +V+VKW KE F  VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW  + +K G  L+MMG+AD + + P    VFVED+ EE+   ++    GL NLGNTCYMN+T+QC+ SVPELK AL +Y+ + R++   +   Y+
Sbjct:    3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYI 152          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_HUMAN (Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14 PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 7.650e-38
Identity = 76/151 (50.33%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSKLSYV 516
            + +V+VKW KE F  VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW  + +K G  L+MMG+AD + + P    VFVED+ EE+   ++    GL NLGNTCYMN+T+QC+ SVPELK AL +Y+ + R++   +   Y+
Sbjct:    3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYI 152          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_MOUSE (Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus GN=Usp14 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 2.226e-37
Identity = 75/151 (49.67%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSKLSYV 516
            + +V+VKW KE F  VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW  + +K G  ++MMG+AD + + P    VFVED+ EE+   ++    GL NLGNTCYMN+T+QC+ SVPELK AL +Y+ + R++   +   Y+
Sbjct:    3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYI 152          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_RABIT (Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus GN=USP14 PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37
Identity = 74/151 (49.01%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSKLSYV 516
            + +V+VKW KE F  VE++T + P VFK QL+ LTGV P RQ++MVKGG LKDD DW  + +K G  ++MMG+AD + + P    VFVED+ EE+   ++    GL NLGNTCYMN+T+QC+ SVPELK AL +Y+ + R++   +   Y+
Sbjct:    3 LYSVTVKWGKEKFGGVELNTDEPPMVFKAQLFALTGVQPARQRVMVKGGTLKDD-DWGNIKIKNGMTILMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYI 152          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_BOVIN (Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus GN=USP14 PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37
Identity = 75/151 (49.67%), Postives = 104/151 (68.87%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSKLSYV 516
            + +V+VKW KE F  VE++T + P VFK QL+ LTGV P RQK+MVKGG LKDD DW  + +K G  ++MMG+AD + + P    VFVED+ EE+   ++    GL NLGNTCYMN+T+QC+ SVPELK AL +Y+ + R++   +   Y+
Sbjct:    3 LYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDD-DWGNIKMKNGMTVLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYI 152          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP6_SCHPO (Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces pombe GN=ubp6 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27
Identity = 62/139 (44.60%), Postives = 93/139 (66.91%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSG 480
            M+ ++++WQ + + ++EI+ ++T    K QLY LT VPPERQK++VKGG LKDD     +G+K    L+MMGTA E+   P   P+   +  E+E+    G+ +GL NLGNTCYMNST+Q L ++PEL  A+ +++ SG
Sbjct:    1 MIPIAIRWQGKKY-DLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATLLMMGTAGEL---PTAMPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLRAIPELSDAVSQFNSSG 135          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP14_CAEEL (Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans GN=usp-14 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.023e-22
Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 1
Query:   64 MLTVSVKWQKEVFSNVEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTADEIVKAPEKGPVFVEDLPEEEQVLSLGHSAGLFNLGNTCYMNSTIQCLHSVPEL 447
            M  V+VKWQKE +  VE+DTS  P VFK QL+ LT V PERQK+++ G  L DD DW  + +K+   +MMMG+  EI K P        +  ++ + +S  +  GL NLGNTCY NS +Q L  V EL
Sbjct:    1 MPIVNVKWQKEKYV-VEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDD-DWEGITIKENMTIMMMGSVGEIPKPPTVLEKKQANRDKQAEEISALYPCGLANLGNTCYFNSCVQMLKEVNEL 126          
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Match: UBP6_YEAST (Ubiquitin carboxyl-terminal hydrolase 6 OS=Saccharomyces cerevisiae GN=UBP6 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 48/134 (35.82%), Postives = 76/134 (56.72%), Query Frame = 1
Query:  109 VEIDTSQTPYVFKCQLYDLTGVPPERQKIMVKGGLLKDDSDWSMLGVKQGQRLMMMGTAD-EIVKAPEKGPVFVEDLPEEEQVLSLGH-SAGLFNLGNTCYMNSTIQCLHSVPELKSALIKYSQSGRSNDVGSK 504
            + + T  T    K +  +LT VP  RQK MVKGGL  ++S      +K G  +M++GT D  ++  P K   F+EDL  E+QV        G  N+GNTCY+N+T+Q L+ V +L+  ++ Y+ S   ++ G++
Sbjct:   19 ITLSTDATSADLKSKAEELTQVPSARQKYMVKGGLSGEESIKIYPLIKPGSTVMLLGTPDANLISKPAKKNNFIEDLAPEQQVQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQ 152          
The following BLAST results are available for this feature:
BLAST of BQ623082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
UBP7_ARATH8.520e-7179.86Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabido... [more]
UBP6_ARATH1.206e-6677.08Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabido... [more]
UBP14_PANTR7.650e-3850.33Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan tr... [more]
UBP14_HUMAN7.650e-3850.33Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo s... [more]
UBP14_MOUSE2.226e-3749.67Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus mu... [more]
UBP14_RABIT2.907e-3749.01Ubiquitin carboxyl-terminal hydrolase 14 OS=Orycto... [more]
UBP14_BOVIN2.907e-3749.67Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos ta... [more]
UBP6_SCHPO1.224e-2744.60Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizos... [more]
UBP14_CAEEL2.023e-2246.09Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenor... [more]
UBP6_YEAST1.270e-1635.82Ubiquitin carboxyl-terminal hydrolase 6 OS=Sacchar... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00173 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00173 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623082 ID=BQ623082; Name=BQ623082; organism=Citrus sinensis; type=EST; length=593bp
AAAACCGAACTGTTCAAAAACCCATTTACACATTTTTCTCGATTTCTCTA
AGCCTCTTCAATCATGCTAACAGTGAGTGTGAAATGGCAAAAGGAGGTCT
TTTCGAATGTGGAAATTGACACTAGCCAGACCCCTTATGTTTTCAAGTGT
CAATTGTATGATCTGACTGGTGTGCCACCAGAAAGGCAGAAGATTATGGT
AAAGGGCGGTTTACTGAAGGATGATTCAGATTGGTCAATGTTAGGAGTGA
AACAGGGTCAAAGATTGATGATGATGGGAACAGCAGATGAGATTGTGAAG
GCTCCTGAGAAGGGACCTGTTTTTGTGGAAGATCTTCCTGAAGAAGAACA
AGTGTTATCACTGGGTCATAGTGCTGGCCTGTTCAATTTGGGAAACACCT
GCTACATGAACTCCACCATCCAGTGCCTGCATTCTGTTCCAGAGTTGAAG
TCTGCTTTAATTAAGTATTCACAGTCTGGAAGAAGCAATGATGTGGGATC
AAAGCTCTCATATGTTGACAGTTGCTACTTCTAAATTATTTAATGATCTT
GATAAAAGTGGGAAGCCTGTGGCTCCTATGCAGTTTTGGATGC
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