BQ623135

Overview
NameBQ623135
Unique NameBQ623135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:1021..1483. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.889e-25
Identity = 45/52 (86.54%), Postives = 50/52 (96.15%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 158
            HGVL+VGYGS+G+APIR KEKPYW+IKNSWGENWGENGYYKIC GRN+CGVD
Sbjct:   31 HGVLLVGYGSAGYAPIRLKEKPYWVIKNSWGENWGENGYYKICRGRNICGVD 82          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.299e-23
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 158
            HGVL+VGYG++G+AP RFKEKPYWIIKNSWGE WGENG+YKIC GRN+CGVD
Sbjct:  302 HGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVD 353          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 8.421e-23
Identity = 46/55 (83.64%), Postives = 49/55 (89.09%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG---RNVCGVD 158
            HGVL+VGYG+SGFAPIR K+KPYWIIKNSWGENWGENGYYKIC G   RN CGVD
Sbjct:  303 HGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVD 357          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.876e-22
Identity = 42/52 (80.77%), Postives = 48/52 (92.31%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 158
            HGVL+VGYGS+GF+  R KEKPYWIIKNSWGE+WGENG+YKIC GRN+CGVD
Sbjct:  299 HGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVD 350          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVD 158
            HGVL+VG+G   +APIR KEKPYWIIKNSWG+NWGE GYYKIC GRNVCGVD
Sbjct:  299 HGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVD 350          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 6.049e-13
Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 155
            HGVL+VGYG S + P   K  PYWI+KNSWG  WGE GYY++  G N CGV
Sbjct:  555 HGVLVVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV 604          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 155
            H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+N+CGV
Sbjct:  305 HAVLAVGYGVED-------DVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.657e-11
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 3
Query:    3 HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 155
            H VL VGYG     P       YW+IKNSWG +WG+NGY+K+ MG+N+CG+
Sbjct:  309 HAVLAVGYGVENGVP-------YWLIKNSWGADWGDNGYFKMEMGKNMCGI 352          
The following BLAST results are available for this feature:
BLAST of BQ623135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PAPA5_CARPA6.889e-2586.54Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
RD19A_ARATH1.299e-2382.69Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CYSP1_MAIZE8.421e-2383.64Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
A494_ARATH1.876e-2280.77Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP_PEA2.450e-2280.77Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CPR1_DROME6.049e-1360.78Putative cysteine proteinase CG12163 OS=Drosophila... [more]
ALEUL_ARATH7.394e-1154.90Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ORYC_ORYSJ9.657e-1152.94Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00226 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00226 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623135 ID=BQ623135; Name=BQ623135; organism=Citrus sinensis; type=EST; length=463bp
ATCATGGAGTGCTTATCGTGGGCTATGGATCTTCAGGTTTCGCCCCGATC
CGTTTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGAA
CTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGTG
GGGTCGACTCCATGGTCTCATCTGTAGCTGCTGTCCATACAACCTCAAGC
TAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTATATACGAAGATA
TTATAGGATATCCTTTTAAATAGCCGTCTGCAATTATAAGGATGCCTACA
TGCGTGGGCTGAGGCATGAACTTTATATGCTCTTGTAATATTTAAGCATA
TGTCATGTCAGAATGTAATATTTATCCATTTTATAGTTAACCATGCTACA
GAATTGTTATTGAAGATGGTATTAATATTTTCTTTTTATATTGGGCAGGC
TTGTAGAAATATT
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