BQ623138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.093e-65 Identity = 103/119 (86.55%), Postives = 113/119 (94.96%), Query Frame = 2 Query: 113 DPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 DP+Q +VKLFNRW+F+DVQ++D+SL DYIGV +KHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLLTDQNPIQVIVDAV+NSGPREDAT Sbjct: 3 DPTQ--IEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDAT 119 HSP 2 Score: 44.669 bits (104), Expect = 1.093e-65 Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAIYLLTTGARE+AF Sbjct: 135 SPLRRVNQAIYLLTTGAREAAF 156 HSP 3 Score: 34.2686 bits (77), Expect = 1.093e-65 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIGSAGVVRRQAVDI P+ Sbjct: 120 RIGSAGVVRRQAVDISPL 137
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 7.455e-64 Identity = 101/129 (78.29%), Postives = 113/129 (87.60%), Query Frame = 2 Query: 83 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 MA + ++ Q +VKLFNRW+F+DV V DISL DYIGVQ +KHAT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++NSGPREDAT Sbjct: 1 MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDAT 129 HSP 2 Score: 43.1282 bits (100), Expect = 7.455e-64 Identity = 20/22 (90.91%), Postives = 22/22 (100.00%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LLTTGARE+AF Sbjct: 145 SPLRRVNQAIFLLTTGAREAAF 166 HSP 3 Score: 34.2686 bits (77), Expect = 7.455e-64 Identity = 16/18 (88.89%), Postives = 17/18 (94.44%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIGSAGVVRRQAVDI P+ Sbjct: 130 RIGSAGVVRRQAVDISPL 147
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.202e-54 Identity = 117/179 (65.36%), Postives = 130/179 (72.63%), Query Frame = 2 Query: 83 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATPYWICWCC*ASSCGYFPHCAV*IK--RSIYSPLVLV-----NLLFRNIKT 598 MATA ++ +VKLFNRWT++DV V DISL DYIGVQAAKHAT+VPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLL+D NPIQVI+DA++NSGPREDAT S G AV I R + + L+ FRNIKT Sbjct: 1 MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATR--------IGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKT 171
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4) HSP 1 Score: 181.8 bits (460), Expect = 5.263e-54 Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 2 Query: 89 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+T Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126 HSP 2 Score: 40.4318 bits (93), Expect = 5.263e-54 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LL TGARE+AF Sbjct: 142 SPLRRVNQAIWLLCTGAREAAF 163 HSP 3 Score: 30.4166 bits (67), Expect = 5.263e-54 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 127 RIGRAGTVRRQAVDVSPL 144
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 5.263e-54 Identity = 88/127 (69.29%), Postives = 107/127 (84.25%), Query Frame = 2 Query: 89 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+T Sbjct: 6 TAAPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126 HSP 2 Score: 40.4318 bits (93), Expect = 5.263e-54 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LL TGARE+AF Sbjct: 142 SPLRRVNQAIWLLCTGAREAAF 163 HSP 3 Score: 30.4166 bits (67), Expect = 5.263e-54 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 127 RIGRAGTVRRQAVDVSPL 144
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 8.914e-54 Identity = 84/112 (75.00%), Postives = 101/112 (90.18%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+T Sbjct: 16 DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126 HSP 2 Score: 40.4318 bits (93), Expect = 8.914e-54 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LL TGARE+AF Sbjct: 142 SPLRRVNQAIWLLCTGAREAAF 163 HSP 3 Score: 30.4166 bits (67), Expect = 8.914e-54 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 127 RIGRAGTVRRQAVDVSPL 144
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 5.627e-53 Identity = 81/111 (72.97%), Postives = 98/111 (88.29%), Query Frame = 2 Query: 137 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 VKLFNRW++EDV++ DISL+DYI +++ Y+PH+AGRY+ KRFRKA CPI+ERLTNSLMMHGRNNGKKLMAVRIV HA EIIHL+TDQNPIQ+ VDA++N GPRED+T Sbjct: 28 VKLFNRWSYEDVEIRDISLTDYIQIRSP---VYLPHSAGRYAAKRFRKANCPIIERLTNSLMMHGRNNGKKLMAVRIVAHAFEIIHLMTDQNPIQIAVDAIVNCGPREDST 135 HSP 2 Score: 40.0466 bits (92), Expect = 5.627e-53 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI LLTTGARE++F Sbjct: 151 SPLRRVNQAIALLTTGAREASF 172 HSP 3 Score: 32.3426 bits (72), Expect = 5.627e-53 Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIGSAG VRRQAVD+ P+ Sbjct: 136 RIGSAGTVRRQAVDVSPL 153
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 177.178 bits (448), Expect = 1.242e-52 Identity = 86/127 (67.72%), Postives = 105/127 (82.68%), Query Frame = 2 Query: 89 TAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 TA A ++ P D+KLF +W+ +DVQ+NDISL DYI V+ K+A Y+PH+AGRY+ FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHA EIIHLLT +NP+QV+V+A+INSGPRED+T Sbjct: 6 TATPAVAETP-----DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDST 126 HSP 2 Score: 40.4318 bits (93), Expect = 1.242e-52 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LL TGARE+AF Sbjct: 142 SPLRRVNQAIWLLCTGAREAAF 163 HSP 3 Score: 30.4166 bits (67), Expect = 1.242e-52 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 127 RIGRAGTVRRQAVDVSPL 144
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster GN=RpS5a PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.842e-50 Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = 2 Query: 83 MATAVVAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 + T VV+ ++ P ++KLF RW+ +DV VNDISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+ EIIHLLT +NP+Q++V A+INSGPRED+T Sbjct: 28 LETNVVSTTELP-----EIKLFGRWSCDDVTVNDISLQDYISVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDST 150 HSP 2 Score: 40.4318 bits (93), Expect = 1.842e-50 Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 SPLRRVNQAI+LL TGARE+AF Sbjct: 166 SPLRRVNQAIWLLCTGAREAAF 187 HSP 3 Score: 30.4166 bits (67), Expect = 1.842e-50 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 151 RIGRAGTVRRQAVDVSPL 168
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 6.884e-50 Identity = 78/112 (69.64%), Postives = 97/112 (86.61%), Query Frame = 2 Query: 134 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDAT 469 D+KLF +W E + ++DISL+DYI V+ HA Y+PHTA RY+VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV+H+ EI+HLLT +NP+Q++ +A+ NSGPRED+T Sbjct: 22 DIKLFGKWPLEGLNISDISLTDYIAVKD-NHAVYLPHTAARYAVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVRHSFEIMHLLTGENPLQLVCEAISNSGPREDST 132 HSP 2 Score: 38.1206 bits (87), Expect = 6.884e-50 Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 1 Query: 517 SPLRRVNQAIYLLTTGARESAF 582 +PLRRVNQAI+LL TGARE++F Sbjct: 148 APLRRVNQAIWLLCTGAREASF 169 HSP 3 Score: 30.4166 bits (67), Expect = 6.884e-50 Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 471 RIGSAGVVRRQAVDIFPI 524 RIG AG VRRQAVD+ P+ Sbjct: 133 RIGRAGTVRRQAVDVAPL 150 The following BLAST results are available for this feature:
BLAST of BQ623138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623138 ID=BQ623138; Name=BQ623138; organism=Citrus sinensis; type=EST; length=598bpback to top |