BQ623146

Overview
NameBQ623146
Unique NameBQ623146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6855 contig Csv1_Contig6855:34..671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 6.554e-41
Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV T     TS +PPEKLFK F+L  D L+PKV P  VK  E++ GDGG G+IKK  F EG+ + Y KHRVD +DK+N  Y+YT I  EGDA    I++++Y+ K+V +PDGGS       ++ K   EIKEEQVK G EK  G+FK +EAY LANP+A
Sbjct:    1 MGVFTYETEFTSVIPPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLI--EGDALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.859e-38
Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV T     TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++DKEN  Y+YT I  EGDA   T++ +SYE+K+V +P GGS       ++ K   EIKEE VK G EK   +FK +E Y   +P+A
Sbjct:    1 MGVFTYESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLI--EGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 5.374e-35
Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV T     TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++D+ N  Y YT I  EGDA   TI+ VSYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGVYTFENEYTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLI--EGDALTDTIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.484e-34
Identity = 76/162 (46.91%), Postives = 106/162 (65.43%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV T     TS +PP +LFK FVL  D L+PK+ PQ +K  E++ G+GGPG+IKK  F EG+ + Y KHR+D++D+ +  Y+YT I  EGDA   TI+ +SYE+K+V     GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGVYTFENEFTSEIPPSRLFKAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLI--EGDALTDTIEKISYETKLVAC---GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.550e-34
Identity = 76/162 (46.91%), Postives = 107/162 (66.05%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MG+ T     TS +PP +LFK FVL  D L+PK+ PQ +K+ E++ G+GGPG+IKK  F EG+ + Y KHRVD++D+ +  Y YT I  EGDA   TI+ +SYE+K+V +   GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:    1 MGLYTFENEFTSEIPPPRLFKAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLI--EGDALTDTIEKISYEAKLVAS---GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.496e-32
Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV    +  TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYEIETTSVIPAARLFKAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.258e-32
Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV       TS +P  +LFK F+L+ D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDNLIPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.239e-31
Identity = 74/162 (45.68%), Postives = 100/162 (61.73%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV       TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 73/162 (45.06%), Postives = 100/162 (61.73%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 545
            MGV       TS +P  ++FK F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARMFKAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.113e-31
Identity = 67/159 (42.14%), Postives = 101/159 (63.52%), Query Frame = 3
Query:   66 MGVLTLNV*DTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 542
            MGV       TS + P +L+K  V   D L+PKV+   ++++E++ G+GG G+IKK  FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+ESK+   PDGGS + + +K++ K  A   EE++KGG  +  G+FKALE Y LANP+
Sbjct:    1 MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
The following BLAST results are available for this feature:
BLAST of BQ623146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PRU1_PRUAR6.554e-4152.50Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV8.859e-3848.13Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO5.374e-3547.50Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
MAL11_MALDO3.484e-3446.91Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
PYRC1_PYRCO4.550e-3446.91Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
BEV1D_BETVE2.496e-3245.68Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1G_BETVE4.258e-3245.68Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
BEV1A_BETVE1.239e-3145.68Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
BEV1L_BETVE1.618e-3145.06Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
PR1_MEDSA2.113e-3142.14Class-10 pathogenesis-related protein 1 OS=Medicag... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00237 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00237 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623146 ID=BQ623146; Name=BQ623146; organism=Citrus sinensis; type=EST; length=638bp
AAATTTCCCAATTTTAGTTGATCGGTAGTTTTCATCTTCTTTCTTTGTTT
AACTCTTAGACAATCATGGGTGTTCTCACGTTGAATGTATAGGATACAAG
CACTCTCCCCCCTGAAAAGTTGTTCAAACTTTTTGTCCTTCAGTTCGACA
CCCTTCTGCCCAAAGTCCTGCCTCAGGTTGTAAAGAACGTTGAATTGATT
TCAGGGGATGGAGGCCCTGGAAGCATCAAGAAGTTTAACTTTGTTGAAGG
TGCTGATTGGAAGTACTTTAAGCATAGGGTTGATGCATTGGACAAAGAGA
ACAAGATATACAATTACACGGCAATTGAAGGTGAGGGTGATGCTAACATC
CCTACTATTGATCATGTTTCTTATGAGAGTAAGGTTGTGGGCACCCCTGA
CGGAGGAAGCAAGAGCACCGTTGTTATCAAGTTCTATCCCAAACCAGGTG
CCGAGATTAAGGAAGAGCAGGTTAAGGGAGGCTTGGAAAAGGAGAAGGGA
ATTTTTAAGGCTCTGGAAGCCTATGCCTTGGCAAACCCCAATGCCGTATA
AGCTCTTACGTCAACACTTCACCGCACTTGCGTCGCCTTTGTTGCAACAT
TATGAATAATCATGTTTATGGCTTCCGTATGTCGTGTC
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