BQ623167

Overview
NameBQ623167
Unique NameBQ623167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL1_HUMAN (DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.978e-29
Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 2
Query:   44 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI 427
            S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I
Sbjct:    7 SQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQI 141          

HSP 2 Score: 27.335 bits (59), Expect = 3.978e-29
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  463 KFREIYNFAFAWAKEKGQKSLGI 531
            +F++ Y F F +AK  GQK L +
Sbjct:  153 RFKDFYQFTFNFAKNPGQKGLDL 175          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL1_CHICK (DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.488e-28
Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 2
Query:   44 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI 427
            S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LYNRYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSK EF+ G+  LG DS++K + +I
Sbjct:    7 SQKDKVRQFMVFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASITVLIIAWKFRAATQCEFSKLEFMDGMTELGCDSIEKLKAQI 141          

HSP 2 Score: 27.335 bits (59), Expect = 1.488e-28
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  463 KFREIYNFAFAWAKEKGQKSLGI 531
            +F++ Y F F +AK  GQK L +
Sbjct:  153 RFKDFYQFTFNFAKNPGQKGLDL 175          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL1_MOUSE (DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.938e-28
Identity = 59/135 (43.70%), Postives = 86/135 (63.70%), Query Frame = 2
Query:   44 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI 427
            S +DK++QF+  T +SEK A+  L  +DW L+ A D F+  P+       K   D + LE+LY RYKDP  +  I +DGI   C+DL +DP  I +L+++W  +AAT CEFSKQEF+ G+  LG DS++K + +I
Sbjct:    7 SQKDKVRQFMIFTQSSEKTAVSCLSQNDWKLDVATDNFFQNPELYIRESVKGSLDRKKLEQLYTRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGCDSIEKLKAQI 141          

HSP 2 Score: 27.335 bits (59), Expect = 1.938e-28
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 1
Query:  463 KFREIYNFAFAWAKEKGQKSLGI 531
            +F++ Y F F +AK  GQK L +
Sbjct:  153 RFKDFYQFTFNFAKNPGQKGLDL 175          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL2_HUMAN (DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.276e-28
Identity = 56/132 (42.42%), Postives = 84/132 (63.64%), Query Frame = 2
Query:   44 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFR 418
            S +DK++QF++ T A E+ A+  L  ++W L+ A D F+  P S      ++  D + LE LY RYKDP  +  I VDGI   C+DL +DP  I +LV++W  +AAT CEFS++EF+ G+  LG DS++K +
Sbjct:    7 SQKDKVRQFMACTQAGERTAIYCLTQNEWRLDEATDSFFQNPDSLHRESMRNAVDKKKLERLYGRYKDPQDENKIGVDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSRKEFLDGMTELGCDSMEKLK 138          

HSP 2 Score: 29.6462 bits (65), Expect = 4.276e-28
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  451 KMNKKFREIYNFAFAWAKEKGQKSLGI 531
            K   KF++ Y F F +AK  GQK L +
Sbjct:  149 KDTAKFKDFYQFTFTFAKNPGQKGLDL 175          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL2_MOUSE (DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 5.961e-26
Identity = 67/187 (35.83%), Postives = 107/187 (57.22%), Query Frame = 2
Query:   44 SNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQS------KSLTDTRHLEELYNRYKDPYLD-MILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERISFHAG*AER*TKNSVRYTTLHL--------PGQKKRVRNLWALDTAIGMWQL 559
            + +DK++QF++ T ASE+ A+  L  ++W L+ A D F+  P++      KS  D + LE+LY+RYKDP  +  I +DGI   C+DL +DP  I +LV++W  +AAT CEFSK+EF+ G+  LG DS ++ +  +       E+  K+  ++  L+         PGQK        L+ A+  W+L
Sbjct:    7 AQKDKVRQFMACTQASERTAIYCLTQNEWKLDEATDSFFQNPEAFHRESMKSSVDQKKLEQLYSRYKDPQDENKIGIDGIQQFCDDLSLDPASISVLVIAWKFRAATQCEFSKKEFVDGMTELGCDSTERLKALLPR----LEQELKDPAKFKDLYQFTFTFAKNPGQKG-----LDLEMAVAYWKL 184          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCN1L_DROME (DCN1-like protein OS=Drosophila melanogaster GN=CG7427 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.092e-21
Identity = 46/132 (34.85%), Postives = 79/132 (59.85%), Query Frame = 2
Query:   38 SRSNRDKLQQFVSITGASEKAALQALKASDWHLEGAFDVFYSQPQSKSLT-DTRHLEELYNRYKDPYLDM-ILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLDKFRERI 427
            S ++RDK+++F+S+T   E+ A+  L+ +DW  E A D ++  P+      D + +E+L+ RY+DP   + I   G+     DL + P   ++L+++W   A   CEFS+ EFI G+  LGIDS+DK + ++
Sbjct:    6 SSTHRDKVKKFISLTHTGEQTAIFCLQQNDWKFELASDNYFQNPEYYYRELDRKRIEQLFMRYRDPSDPLKIGSQGVIHFLEDLDLKPDSKLVLIIAWKFHAEVQCEFSRDEFINGMCDLGIDSIDKLKTKL 137          

HSP 2 Score: 29.261 bits (64), Expect = 1.092e-21
Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  463 KFREIYNFAFAWAKEKGQKSLGI 531
            KF++ Y+F F +AK+ GQK + +
Sbjct:  149 KFKDFYHFTFNYAKDPGQKGIDL 171          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL3_XENTR (DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1d3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 2
Query:   38 SRSNRDKLQQFVSITG-ASEKAALQALKASDWHLE-------GAFDVFYSQPQSKSLTDTRHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 409
            S S++D   + +SI G AS +  +   K  D  LE       G       Q     L+  + +EEL+ RYKD   D IL +G+   CNDL VDP +  +LV++W  +AATMC+F+++EF  G +++  D ++
Sbjct:   31 SSSHKD---EHLSICGKASREILVNGTKKGDVSLEASQPLAAGGDTKKKEQGTGAELSSVQRIEELFWRYKDEREDAILEEGMERFCNDLYVDPTEFRVLVLAWKFQAATMCKFTRREFFEGCKAINADGIE 159          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL3_RAT (DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  194 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 409
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSID 160          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL3_PONAB (DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  194 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 409
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSID 160          
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Match: DCNL3_MOUSE (DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 2
Query:  194 RHLEELYNRYKDPYLDMILVDGITLLCNDLQVDPQDIVMLVVSWHMKAATMCEFSKQEFIGGLQSLGIDSLD 409
            + LEEL+ RYKD   D IL +G+   CNDL VDP +  +L+++W  +AATMC+F+++EF  G +++  DS+D
Sbjct:   89 QRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISADSID 160          
The following BLAST results are available for this feature:
BLAST of BQ623167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
DCNL1_HUMAN3.978e-2944.44DCN1-like protein 1 OS=Homo sapiens GN=DCUN1D1 PE=... [more]
DCNL1_CHICK1.488e-2843.70DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE... [more]
DCNL1_MOUSE1.938e-2843.70DCN1-like protein 1 OS=Mus musculus GN=Dcun1d1 PE=... [more]
DCNL2_HUMAN4.276e-2842.42DCN1-like protein 2 OS=Homo sapiens GN=DCUN1D2 PE=... [more]
DCNL2_MOUSE5.961e-2635.83DCN1-like protein 2 OS=Mus musculus GN=Dcun1d2 PE=... [more]
DCN1L_DROME1.092e-2134.85DCN1-like protein OS=Drosophila melanogaster GN=CG... [more]
DCNL3_XENTR1.166e-1334.85DCN1-like protein 3 OS=Xenopus tropicalis GN=dcun1... [more]
DCNL3_RAT1.166e-1345.83DCN1-like protein 3 OS=Rattus norvegicus GN=Dcun1d... [more]
DCNL3_PONAB1.166e-1345.83DCN1-like protein 3 OS=Pongo abelii GN=DCUN1D3 PE=... [more]
DCNL3_MOUSE1.166e-1345.83DCN1-like protein 3 OS=Mus musculus GN=Dcun1d3 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00258 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00258 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623167 ID=BQ623167; Name=BQ623167; organism=Citrus sinensis; type=EST; length=560bp
ATATCAAATTCACAAGCTCCCGAGATGCATAAGCGTGAGTAGAAGTAACC
GGGACAAACTCCAACAATTTGTCTCGATAACTGGGGCAAGCGAAAAAGCT
GCTCTTCAGGCTTTGAAGGCTAGTGACTGGCATCTTGAAGGAGCATTTGA
TGTATTCTATAGCCAACCTCAATCAAAATCACTAACTGATACCAGACATT
TGGAGGAGCTTTATAACAGATATAAAGATCCATATCTTGATATGATTCTG
GTTGACGGTATCACTCTCCTGTGCAATGACCTTCAGGTGGATCCTCAAGA
TATAGTTATGTTAGTTGTTTCATGGCACATGAAAGCTGCTACAATGTGTG
AATTCTCAAAGCAGGAGTTCATAGGTGGATTGCAATCACTAGGGATAGAT
TCTCTGGATAAGTTCCGTGAAAGGATATCATTTCATGCGGGCTGAGCTGA
AAGATGAACAAAAAATTCCGTGAGATATACAACTTTGCATTTGCCTGGGC
AAAAGAAAAGGGTCAGAAATCTCTGGGCATTGGACACTGCAATCGGAATG
TGGCAATTAT
back to top