BQ623172

Overview
NameBQ623172
Unique NameBQ623172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623172 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 8.216e-37
Identity = 76/125 (60.80%), Postives = 88/125 (70.40%), Query Frame = 2 
Query:    2 SLAEAVEILAQHRILSAPVVDVDAPEDASWIDRYIGIVEFAGIAVWILHQXXXXXXXXXXXXXXXXXXVNGMSKAALFKDLGPESASMTSGNFFEALTTSEFYKNTKVRDIAGSFRWAPFLALQK 376
            SLAEAV+ L++ ++LSAPVVDVDAPEDASWIDRYIGIVEF GI VW+LHQ                   NG S       L    +++TSGNFFE LT+SE YKNTKVRDI+G+FRWAPFLALQK
Sbjct:   77 SLAEAVQTLSKFKVLSAPVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLEPPSPRSPAVAAS-----NGFSHDFTTDVLDNGDSAVTSGNFFEVLTSSELYKNTKVRDISGTFRWAPFLALQK 196

HSP 2 Score: 30.0314 bits (66), Expect = 8.216e-37
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = 1 
Query:  412 KYKMKSIPVVDLG 450
            KYKMKSIPVVDLG
Sbjct:  209 KYKMKSIPVVDLG 221
The following BLAST results are available for this feature:
BLAST of BQ623172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH8.216e-3760.80SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00263 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00263 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623172 ID=BQ623172; Name=BQ623172; organism=Citrus sinensis; type=EST; length=482bp
CAGTCTAGCTGAAGCAGTTGAAATACTGGCCCAACACAGAATTCTTAGTG
CTCCTGTAGTGGATGTTGATGCACCTGAGGATGCTAGTTGGATAGACAGA
TACATTGGCATTGTTGAGTTTGCAGGAATTGCTGTATGGATTTTGCATCA
GTCAGAACCTCCTTCTCCAAGGAGTTCATCCCCTAGTTCTGCTTTGGCTG
CAGCAGTTAATGGCATGTCTAAGGCTGCTCTATTTAAGGATTTAGGCCCT
GAATCTGCTTCAATGACTTCCGGAAACTTTTTTGAAGCTTTGACTACTTC
TGAATTCTATAAGAACACTAAGGTACGAGACATCGCAGGGTCATTTCGCT
GGGCTCCATTCCTTGCTCTGCAGAAATCCAACTCCTTCTTGACCATGCTT
CTGTTGCTTTCAAGTACAAAATGAAGAGCATTCCTGTAGTTGATTTGGGT
GAAAGGGACAATTGGTAACATTATCACCCAGT
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