BQ623223

Overview
NameBQ623223
Unique NameBQ623223
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11205 contig Csv1_Contig11205:722..1348. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.056e-96
Identity = 151/210 (71.90%), Postives = 182/210 (86.67%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCI--SKDVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L+KGAVLKA+C+GFQE+TEPAICL+ED+ETNECLENNGGCWQDKAANITAC+DTFRGR+CECP V+GVKFVGDGYTHC+ASGA  C INNGGCW++ + G ++SACV++    CKCP GF+GDGV NCEDVDEC+EK  CQCPECKCK+TWGSYECSC +GLLYM+EHDTCI   K   ++ SW F+W++I+G+   G++GYA YKYRIR
Sbjct:  383 LEKGAVLKAMCSGFQESTEPAICLTEDLETNECLENNGGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCIGSGKVGTTKLSWSFLWILIIGVGVAGLSGYAVYKYRIR 592          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 5.795e-95
Identity = 144/208 (69.23%), Postives = 175/208 (84.13%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L + AVLKA+C+GF+ETTEP ICL+EDIETNECL+NNGGCW+DK  NITAC+DTFRGRVC+CPIV+GVKF+GDGYTHCEASGA RC INNGGCWK+ Q GK++SAC ++   GCKCPPGF GDG+  C+DV+ECEEK ACQC +CKCK+TWGSYECSC   LLY++EHD CI++D R + SWG +W++I+GL A  +  Y  YKYRIR
Sbjct:  387 LQRSAVLKALCSGFRETTEPPICLTEDIETNECLQNNGGCWEDKTTNITACRDTFRGRVCQCPIVQGVKFLGDGYTHCEASGALRCGINNGGCWKQTQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDARGDFSWGVIWIIIMGLGAAALGAYTVYKYRIR 594          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 6.205e-89
Identity = 138/209 (66.03%), Postives = 170/209 (81.34%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK-DVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L+K AVLKA+C+GF+E+TEPAICLS D+ETNECL+NNGGCWQDK+ANITACKDTFRG+VC CPIV GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDGV  CED++EC+EK ACQCPEC CK+TWGSYECSC   LLYM++HDTCISK   + +++W  VW+++L L       Y  YKYR+R
Sbjct:  388 LEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTFRGKVCVCPIVDGVRFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGVKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYMRDHDTCISKTGSQVKSAWAAVWLIMLSLGLAAAGAYLVYKYRLR 596          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 8.104e-89
Identity = 137/209 (65.55%), Postives = 168/209 (80.38%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISK-DVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L+K AVLKA+C+GF+ETTEPAICLS D+E+NECL+NNGGCWQDK+ANITACKDTFRGRVCECP V GV+F GDGY+HCE SG  RC+INNGGCW + +DG +FSACV+     C+CPPGF+GDG   CED++EC+EK ACQCPEC CK+TWGSYECSC   LLY+++HDTCISK   +  ++W  VW+++L L       Y  YKYR+R
Sbjct:  388 LEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTFRGRVCECPTVDGVQFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCECPPGFKGDGTKKCEDINECKEKKACQCPECSCKNTWGSYECSCSGDLLYIRDHDTCISKTGAQVRSAWAAVWLIMLSLGLAAAGAYLVYKYRLR 596          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.882e-86
Identity = 134/209 (64.11%), Postives = 166/209 (79.43%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDV-RSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L+KGAVLKAIC+GF+ETT+PA+CLS D+ETNECL NNGGCWQDK ANI ACKDTFRGRVCECP+V GV+F GDGYT CE SG  RC INNGGCW   ++G +FSAC+++    C+CP GF+GDGV NCED+DEC++K ACQCPEC CK+TWGSY CSC   LLY+++ DTCISK   +++++W   W+V++ L      G+  YKYRIR
Sbjct:  383 LEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGCWQDKTANIAACKDTFRGRVCECPLVDGVQFKGDGYTTCEVSGHGRCKINNGGCWHDARNGHAFSACLDDGGVKCQCPAGFKGDGVKNCEDIDECKDKKACQCPECSCKNTWGSYNCSCSGDLLYIKDQDTCISKTASQAKSTWAAFWVVLIALAMIAGGGFLVYKYRIR 591          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 3.532e-76
Identity = 119/208 (57.21%), Postives = 159/208 (76.44%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L++ AVLKAICAGF ET+EPAICL+  +ETNECLENNGGCWQD  ANITAC+DTFRGR+CECP+V+GV++ GDGYT C   G +RC++NNGGCW   ++G +FSAC ++   GCKCP GF+GDG+  CED++EC+E+  CQC  C+CK++WG Y+CSC    LY+ + DTCI +   S+ +W   ++++  +   G+AGY FYKYR R
Sbjct:  386 LERTAVLKAICAGFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPARCTMNNGGCWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL-TCEDINECKERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIER-YGSKTAWWLTFLILAIVAVAGLAGYIFYKYRFR 591          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.256e-73
Identity = 116/208 (55.77%), Postives = 153/208 (73.56%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L++ AVLKAIC+GF+E TEP+ICL+ DIETNECL  NGGCWQDK +N+TACKDTFRGRVCECP+V GV++ GDGYT C+  G +RCS+NNG CW + + G +FS+C ++   GC+CP GF GDG+  CED+DEC+EK AC+C  CKCK+ WG YEC C +  +YM+E DTCI +   S +   F  +V+  +    +  Y FYKY ++
Sbjct:  384 LERTAVLKAICSGFKERTEPSICLNSDIETNECLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPARCSMNNGDCWSETRKGLTFSSCSDSETSGCRCPLGFLGDGL-KCEDIDECKEKSACKCDGCKCKNNWGGYECKCSNNSIYMKEEDTCIERRSGSRSRGLFTIVVLTAIAGISLGAYIFYKYHLQ 590          
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 4.468e-71
Identity = 118/208 (56.73%), Postives = 147/208 (70.67%), Query Frame = 2
Query:    2 LDKGAVLKAICAGFQETTEPAICLSEDIETNECLENNGGCWQDKAANITACKDTFRGRVCECPIVRGVKFVGDGYTHCEASGASRCSINNGGCWKKIQDGKSFSACVENSLHGCKCPPGFRGDGVNNCEDVDECEEKLACQCPECKCKDTWGSYECSCGSGLLYMQEHDTCISKDVRSEASWGFVWMVILGLTATGVAGYAFYKYRIR 625
            L++ AVLKAIC+GF+E TEP ICLS DIETNECLE NGGCW+DK +N+TACKDTFRGRVCECP+V GV++ GDGYT CE  G +RCSIN GGCW + + G +FSAC      GC+CPPGF+GDG+       +CE   ACQC  C CK+ WG +EC C    LYM+E DTCI +   S   W   ++++  + +  V GY FYKYR+R
Sbjct:  385 LERNAVLKAICSGFKERTEPGICLSGDIETNECLEANGGCWEDKKSNVTACKDTFRGRVCECPVVNGVQYKGDGYTSCEPYGPARCSINQGGCWSETKKGLTFSACSNLETSGCRCPPGFKGDGL-------KCE---ACQCDGCNCKNKWGGFECKCSGNRLYMKEQDTCIERS-GSRIGWFPTFVILAAVASICVGGYVFYKYRLR 581          
The following BLAST results are available for this feature:
BLAST of BQ623223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH1.056e-9671.90Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR2_ARATH5.795e-9569.23Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR4_ARATH6.205e-8966.03Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR3_ARATH8.104e-8965.55Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR1_PEA2.882e-8664.11Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH3.532e-7657.21Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR5_ARATH1.256e-7355.77Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
VSR6_ARATH4.468e-7156.73Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00314 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00314 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623223 ID=BQ623223; Name=BQ623223; organism=Citrus sinensis; type=EST; length=627bp
GTTGGACAAGGGAGCAGTTCTCAAGGCTATTTGTGCAGGTTTTCAGGAGA
CTACAGAGCCAGCCATATGCTTAAGTGAAGATATTGAAACTAATGAATGC
TTAGAAAACAATGGTGGGTGCTGGCAGGACAAAGCCGCTAACATAACAGC
ATGCAAGGATACTTTCCGAGGAAGAGTGTGCGAATGTCCTATAGTACGAG
GTGTGAAGTTTGTTGGTGATGGTTATACTCATTGTGAAGCTTCAGGAGCT
TCACGCTGTTCAATTAATAATGGAGGGTGTTGGAAGAAAATCCAAGATGG
CAAATCTTTTTCTGCTTGTGTTGAGAATAGCTTGCATGGTTGCAAGTGTC
CACCTGGATTTAGGGGTGATGGAGTCAACAACTGTGAAGATGTGGATGAG
TGCGAAGAGAAGCTGGCATGTCAATGCCCAGAGTGCAAATGCAAAGATAC
ATGGGGCAGTTACGAGTGCAGCTGTGGCAGTGGATTGTTGTACATGCAAG
AGCATGACACCTGCATAAGCAAAGATGTTAGATCGGAGGCTAGCTGGGGC
TTTGTATGGATGGTCATTCTTGGCTTAACAGCTACTGGCGTTGCAGGATA
TGCATTTTACAAGTACAGAATCCGGAG
back to top