BQ623278

Overview
NameBQ623278
Unique NameBQ623278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5158 contig Csv1_Contig5158:245..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.862e-74
Identity = 135/154 (87.66%), Postives = 145/154 (94.16%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTI-ATDEGGFGTVEMVEMSIQEAPE 461
            HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDS DFGDNNLVGWVKQHAKL+ISDVFDPELMKEDP +EIELLQHL VA ACLDDR WRRPTM+QVMAMFKEIQAGSG+DSQSTI + ++GGF T+EMV+MSI+E PE
Sbjct: 1040 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQHAKLRISDVFDPELMKEDPALEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQAGSGIDSQSTIRSIEDGGFSTIEMVDMSIKEVPE 1193          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.210e-65
Identity = 128/160 (80.00%), Postives = 138/160 (86.25%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGF----GTVEM-VEMSIQEAPELS 467
            HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK+PTDSADFGDNNLVGWVK HAK KI+DVFD EL+KED +IEIELLQHL VA ACLDDR W+RPTMIQVMAMFKEIQAGSG+DS STI  D+  F    G +EM +  SI+E  ELS
Sbjct: 1045 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSGMDSTSTIGADDVNFSGVEGGIEMGINGSIKEGNELS 1204          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.210e-65
Identity = 128/160 (80.00%), Postives = 138/160 (86.25%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGF----GTVEM-VEMSIQEAPELS 467
            HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGK+PTDSADFGDNNLVGWVK HAK KI+DVFD EL+KED +IEIELLQHL VA ACLDDR W+RPTMIQVMAMFKEIQAGSG+DS STI  D+  F    G +EM +  SI+E  ELS
Sbjct: 1045 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGWVKLHAKGKITDVFDRELLKEDASIEIELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSGMDSTSTIGADDVNFSGVEGGIEMGINGSIKEGNELS 1204          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43
Identity = 89/154 (57.79%), Postives = 116/154 (75.32%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGGFGTVEMVEMSIQEAP 458
            HLSVSTLAGTPGYVPPEYYQSFRC+ KGDVYSYGV+LLELL+GK+P D  +FG DNNLVGW KQ + + + +++ DPEL+  D + ++EL  +L +AS CLDDRP++RPTMIQ+MAMFKE++A    D++   + DE       +VE S  + P
Sbjct: 1018 HLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELV-TDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFKEMKA----DTEEDESLDEFSLKETPLVEESRDKEP 1166          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.078e-41
Identity = 82/121 (67.77%), Postives = 102/121 (84.30%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFG-DNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            HLSVSTLAGTPGYVPPEYYQSFRC+ KGDVYSYGV+LLELL+GK+P D  +FG DNNLVGW KQ + + + +++ DPEL+  D + ++ELL +L +AS CLDDRP++RPTMIQVM MFKE+
Sbjct: 1016 HLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELV-TDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKEL 1135          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.458e-35
Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKL-KISDVFDPELMKEDPN-------------IEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQS 389
            HLSVSTLAGTPGYVPPEYYQSFRC+ KGDVYS GVV+LE+L+GKRPTD  +FGD NLVGW K  A+  K  +V D +L+KE  +             I  E+L++L +A  C+DD P +RP M+QV+A  +E++ GS  +S S
Sbjct:  997 HLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELR-GSENNSHS 1138          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20
Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 3
Query:    3 HLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPT--DSADFGDNNLVGWVKQHAKL-KISDVFDPELMKED-PNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            H+S + +AGT GY+PPEY QS R +TKGDVYS+GV+LLEL+TGK PT  D  +    NLVGW  Q     K  DV DP L+     N ++ LLQ   +A  CL + P +RP M+ V+   KEI
Sbjct: 1074 HVS-TVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQ---IAMLCLAETPAKRPNMLDVLKALKEI 1192          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 3
Query:   21 LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SADFGDNNLVGWVKQ-HAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGS 371
            L GT GY+PPEY Q+   + KGDVYS+GVVLLELLTG+RP D     G  +L+ WV Q   + + S++FDP +  +D   E+ L+  L +A  CL + P  RPT  Q+++  + I   S
Sbjct:  905 LVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFDPFIYDKDHAEEMLLV--LEIACRCLGENPKTRPTTQQLVSWLENIDVSS 1021          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 3
Query:    9 SVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWV-KQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEIQAGSGLDSQSTIATDEGG 413
            ++S +AG+ GY+ PEY  + R + K D+YS+GVVLLEL+TGK+PTDS + GD ++  WV     K  +  V DP+L   D   + E+ + +H+   C    P  RP+M +V+ M +E+       S +T    + G
Sbjct:  854 AMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDS-ELGDKDMAKWVCTALDKCGLEPVIDPKL---DLKFKEEISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVPCSSPNTSKRSKTG 985          
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 52/119 (43.70%), Postives = 75/119 (63.03%), Query Frame = 3
Query:   12 VST-LAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSA-DFGDNNLVGW-VKQHAKLKISDVFDPELMKEDPNIEIELLQHLHVASACLDDRPWRRPTMIQVMAMFKEI 359
            VST L GT GY+PPEY Q+   + KGDVYS+GVVLLELLT KRP D     G  +L+ W VK   + + S+VFDP +  ++   + E+ + L +A  CL + P +RPT  Q+++   ++
Sbjct:  892 VSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHESRASEVFDPLIYSKEN--DKEMFRVLEIACLCLSENPKQRPTTQQLVSWLDDV 1008          
The following BLAST results are available for this feature:
BLAST of BQ623278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
BRI1_ARATH1.862e-7487.66Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
BRI1_SOLPE1.210e-6580.00Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC1.210e-6580.00Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRL1_ARATH6.461e-4357.79Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH2.078e-4167.77Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
BRL2_ARATH8.458e-3554.55Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
EXS_ARATH1.549e-2048.78Leucine-rich repeat receptor protein kinase EXS OS... [more]
PSKR1_DAUCA5.508e-1843.70Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
RLK5_ARATH9.395e-1836.76Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
PSKR1_ARATH2.093e-1743.70Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00369 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00369 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623278 ID=BQ623278; Name=BQ623278; organism=Citrus sinensis; type=EST; length=704bp
CACATTTGAGTGTCAGTACGCTAGCAGGCACACCCGGCTATGTCCCTCCC
GAATACTATCAAAGCTTTAGATGTTCGACGAAAGGCGATGTTTACAGTTA
TGGTGTAGTTTTGCTCGAGTTGCTAACGGGAAAAAGGCCAACAGATTCAG
CAGATTTCGGTGACAATAACCTAGTTGGGTGGGTAAAGCAGCATGCGAAG
CTGAAAATAAGCGATGTCTTTGATCCAGAACTCATGAAGGAGGATCCAAA
CATCGAGATTGAGCTTCTTCAACACTTGCATGTAGCGAGTGCTTGCCTGG
ATGATCGACCATGGAGGAGACCGACAATGATTCAGGTTATGGCAATGTTT
AAAGAAATCCAAGCCGGTTCAGGACTTGACTCGCAATCTACTATTGCCAC
TGATGAAGGAGGTTTCGGTACAGTCGAAATGGTAGAGATGAGCATCCAAG
AAGCTCCAGAACTAAGCACCAAGCCTTAAGCCATTCAATTTTCAGGACAA
GCATTCTTTCAGTGCCCCAAAATTTTCCCACTTGAAAACCAAAAAAGTTG
CCTTTGTATCTCTACCATTTAGTGTATGTAATCTTTGTATCCCTTTTGAA
AATTCTTGTTATTTATACATAAAAAAAAAAAAGTTGCTTTTAACTTTGTT
ATCGAATGTGTAAATATACAACCCCAAGTTTGTTATGCTATCTTGGTTCT
TTAA
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