BQ623283

Overview
NameBQ623283
Unique NameBQ623283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623283 vs. ExPASy Swiss-Prot
Match: HY5_ARATH (Transcription factor HY5 OS=Arabidopsis thaliana GN=HY5 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.120e-42
Identity = 90/126 (71.43%), Postives = 98/126 (77.78%), Query Frame = 1 
Query:  100 HLEVKEGMESDEEIRRVPEIGGEPAGTSASGRELVSTGGPDRVQQ-LGEGQRKRGRSPADKEXXXXXXXXXXXVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNTT 474
            HLE+KEG+ESDEEIRRVPE GGE  G   SGRE  S  G +R Q  +GE QRKRGR+PA+KE           VSAQQARERKKAYL+ELE RVKDLE KNSEL+ERLSTLQNENQMLRHILKNTT
Sbjct:   27 HLEIKEGIESDEEIRRVPEFGGEAVGKETSGRESGSATGQERTQATVGESQRKRGRTPAEKENKRLKRLLRNRVSAQQARERKKAYLSELENRVKDLENKNSELEERLSTLQNENQMLRHILKNTT 152
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BLAST of BQ623283 vs. ExPASy Swiss-Prot
Match: HY5_SOLLC (Transcription factor HY5 OS=Solanum lycopersicum GN=HY5 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.056e-39
Identity = 90/128 (70.31%), Postives = 99/128 (77.34%), Query Frame = 1 
Query:   97 LHLEVKEGMESDEEIRRVPEIGGEPAGT-SASGRELVSTGGPDRVQQLGEGQRKRGRSPADKEXXXXXXXXXXXVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNTTA 477
            LH E+KEGMESD+EIRRVPE+GGE  GT SASGR+ VS  G  + Q     QRKRGRSPADKE           VSAQQARERKKAYL +LE RVK+LE KN+EL+ERLSTLQNENQMLRHILKNTTA
Sbjct:   26 LHHELKEGMESDDEIRRVPEMGGEATGTTSASGRDGVSAAG--QAQPSAGTQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLEARVKELETKNAELEERLSTLQNENQMLRHILKNTTA 151
[Close]
BLAST of BQ623283 vs. ExPASy Swiss-Prot
Match: HYH_ARATH (Transcription factor HY5-like OS=Arabidopsis thaliana GN=HYH PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 53/119 (44.54%), Postives = 73/119 (61.34%), Query Frame = 1 
Query:  124 ESDEEIRRVP--EIGGEPAGTSASGRELVSTGGPDRVQQ-LGEGQRKRGRSPADKEXXXXXXXXXXXVSAQQARERKKAYLNELETRVKDLERKNSELDERLSTLQNENQMLRHILKNT 471
            ESDEE+  VP  E  G     S+S  + V+    D+ Q  +   +R+RGR+P DKE           VSAQQARERKK Y+++LE+R  +L+  N +L+E++STL NEN MLR +L NT
Sbjct:   23 ESDEELLMVPDMEAAGSTCVLSSSADDGVNNPELDQTQNGVSTAKRRRGRNPVDKEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLTNENTMLRKMLINT 141
The following BLAST results are available for this feature:
BLAST of BQ623283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HY5_ARATH5.120e-4271.43Transcription factor HY5 OS=Arabidopsis thaliana G... [more]
HY5_SOLLC4.056e-3970.31Transcription factor HY5 OS=Solanum lycopersicum G... [more]
HYH_ARATH1.357e-1844.54Transcription factor HY5-like OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00374 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00374 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623283 ID=BQ623283; Name=BQ623283; organism=Citrus sinensis; type=EST; length=593bp
GAAGAAATAGGAGAAGAAGAAATGCAAGAACAAGCAACGAGTTCAATTGC
AGCCAGTTCTTTGCCGTCTAGCAGCGAGCGATCTTCAAGCTCTGCTCTTC
ATCTCGAAGTCAAAGAAGGTATGGAGAGCGATGAAGAGATCAGAAGAGTC
CCAGAGATCGGCGGCGAACCCGCGGGAACGTCAGCTTCCGGAAGAGAACT
CGTGTCGACGGGCGGTCCTGACCGAGTACAGCAGTTAGGAGAAGGTCAGA
GGAAGAGAGGCAGAAGCCCAGCTGACAAAGAAAACAAGAGATTGAAGAGG
TTGTTGAGGAACAGAGTGTCAGCTCAGCAAGCAAGAGAGAGGAAAAAGGC
GTACTTGAATGAGTTGGAGACGAGAGTTAAAGACTTGGAGAGGAAGAATT
CCGAGCTCGATGAGAGGCTCTCCACGTTGCAAAATGAGAATCAGATGCTG
AGACACATACTGAAGAACACCACGGCGAGCCGAAGAGGAGGAAGCCGGCG
GTGATACAAATGCCCGATGGGTCCTTTTAATAGAATAAGAAAAGAAGGAA
TATTCTTACTGAGAGAGTTACTTTTTATGAAAAATAGAACCGG
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