BQ623291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4_ARATH (Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana GN=PUB1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.275e-32 Identity = 70/95 (73.68%), Postives = 80/95 (84.21%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRHGEGLNIQSIKDTIQTTNGDMLID 288 FLDPIQYTLM+DPVILPSSRITVDRP+IQRHLLSD DPFNR+HLT+DMLIP+ ELKAKI+EF+KS K+ G + S K+ IQTTN DMLID Sbjct: 945 FLDPIQYTLMRDPVILPSSRITVDRPIIQRHLLSDNHDPFNRAHLTSDMLIPDIELKAKIDEFVKSHQSKKRTSGED-SSNKERIQTTNSDMLID 1038
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4A_BOVIN (Ubiquitin conjugation factor E4 A OS=Bos taurus GN=UBE4A PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.112e-19 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 195 FLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 992 FLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4A_PONAB (Ubiquitin conjugation factor E4 A OS=Pongo abelii GN=UBE4A PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 195 FLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 992 FLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4A_HUMAN (Ubiquitin conjugation factor E4 A OS=Homo sapiens GN=UBE4A PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.704e-19 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 195 FLDPI TLM DPV+LPSSR+TVDR I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 992 FLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4A_RAT (Ubiquitin conjugation factor E4 A OS=Rattus norvegicus GN=Ube4a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.369e-18 Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 195 FLDPI TLM DPV+LPSSR+TVD I RHLLSD TDPFNRS LT D + PNTELK KI+ ++ Sbjct: 992 FLDPIMSTLMSDPVVLPSSRVTVDGSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 1055
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UFD2_SCHPO (Ubiquitin conjugation factor E4 OS=Schizosaccharomyces pombe GN=ufd2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.750e-17 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 204 FLDP+ +T+MKDPV+LP S I++DR I+ HLLSDATDPFNR+ LT D + PN L+ +I F+KS+ Sbjct: 935 FLDPLMFTIMKDPVVLPRSGISIDRSTIKAHLLSDATDPFNRTPLTLDDVTPNDTLREEINTFLKSK 1001
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UFD2_YEAST (Ubiquitin conjugation factor E4 OS=Saccharomyces cerevisiae GN=UFD2 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.850e-15 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQ 204 FLDP+ YT+MKDPVILP+S++ +DR I+ HLLSD+TDPFNR L + + PN EL+ KI F K + Sbjct: 885 FLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQK 951
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4_CAEEL (Probable ubiquitin conjugation factor E4 OS=Caenorhabditis elegans GN=ufd-2 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.764e-11 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFI 195 F DPI +M DPV LPS + +DR VI+RHLLS +PFNR+ L+ + L P++ELKAKI+E+I Sbjct: 910 FKDPIMDAIMVDPVKLPSGHV-MDRAVIERHLLSTPNNPFNRAPLSHNELSPDSELKAKIQEWI 972
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4B_MOUSE (Ubiquitin conjugation factor E4 B OS=Mus musculus GN=Ube4b PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.715e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 219 F DP+ TLM DPV LPS + +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H Sbjct: 1103 FRDPLMDTLMTDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQIQAWMREKQSSDH 1173
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Match: UBE4B_HUMAN (Ubiquitin conjugation factor E4 B OS=Homo sapiens GN=UBE4B PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.715e-11 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 FLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPNTELKAKIEEFIKSQGLKRH 219 F DP+ TLM DPV LPS I +DR +I RHLL+ TDPFNR LT ML P ELK +I+ +++ + H Sbjct: 1232 FRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1302 The following BLAST results are available for this feature:
BLAST of BQ623291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623291 ID=BQ623291; Name=BQ623291; organism=Citrus sinensis; type=EST; length=430bpback to top |