BQ623299

Overview
NameBQ623299
Unique NameBQ623299
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:952..1581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.126e-61
Identity = 113/171 (66.08%), Postives = 127/171 (74.27%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGG 513
            HLRSM GTPLMPGK VDTYIFALYDE+LKPGP+SER+FGLFK DLS  YDVG++KSS                         GWCVPK G ++ +LQASLD+AC  GIDC  IQPGGACFEPN VVSHAA+AMN+Y+Q S K P +CDFSKTAT+TSQNPSYN CVYP GG
Sbjct:  293 HLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSSSQTPSGKVTSS------------GWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGG 451          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.222e-36
Identity = 69/163 (42.33%), Postives = 94/163 (57.67%), Query Frame = 1
Query:   19 GTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPS 507
            GTPLMP ++ +TY+F+L+DE+ KPGP +ER FGLF PD +  YD+G+ +                            WCV K G +   LQ +++YAC   +DC PIQ GGACF PN++ +HA++ MN YYQ +      CDF  T  +TS +PSY GC Y S
Sbjct:  300 GTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGGKWCVAKDGANGTDLQNNINYACGF-VDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKYVS 461          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.279e-27
Identity = 61/175 (34.86%), Postives = 94/175 (53.71%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT*N 522
            H+ +  GTP  PG +V TYI+ LY+ED +PGP SE+++GLF  + +  Y + ++ +                           +C+ K  +    LQA+LD+AC  G +DCS +  G +C+EP+ VV+H+ +A N YYQ   K   +CDF   AT+T+ +PS   CV+P     N
Sbjct:  292 HVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLAGAGAILANDTTNQT---------------FCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFPGSAKSN 451          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.620e-26
Identity = 60/187 (32.09%), Postives = 100/187 (53.48%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY-PSGGT*NGQTNSQLMLNN 555
            H+ +  GTP  PG++++ YIF+L++E+ K G  SER++GLF PD ++ Y +  +  S                          WC+  +  S+  L+ +LD+AC  G +DC+ IQP   CF+P+T+VSHA+F  N Y+Q +      C F       +++PSY+ C+Y  +GG     TN+  + ++
Sbjct:  294 HVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKSNGFHSNSSGTNSSGSSN--------SWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYITAGGNKTKATNATALTSS 472          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.218e-25
Identity = 63/182 (34.62%), Postives = 98/182 (53.85%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT*NGQTNSQL 543
            H+ +  GTP  PG +V TYI+ LY+ED K G  SE+++GLF  +    Y + ++ S                           +C  + G     LQA+LD+AC  G IDCSPI+ G  C+EP+ VV+HA +A + YY  +  NP  C+F+  A++T+ +PS+  CV+ +G   NG+  + +
Sbjct:  301 HVLNKTGTPKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVYVLRLTNSGSVLANDTTNQT---------------YCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF-AGSRGNGRNGTSV 465          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.453e-25
Identity = 59/169 (34.91%), Postives = 88/169 (52.07%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYP 504
            H+    GTPL P  +   YI+ L++EDL+  P SE S+GLF  + +  Y + +S S                           +C+   G+    LQA+LD+AC  G  +CS IQPG +C++PN V  HA+FA N YYQ   +   +CDF   A +T+ +PS+  C++P
Sbjct:  204 HVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQT---------------YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFP 357          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.101e-24
Identity = 59/183 (32.24%), Postives = 94/183 (51.37%), Query Frame = 1
Query:    1 HLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVG--------ISKSSQXXXXXXXXXXXXXXXXXXXXXXXXG-------WCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY 501
            H+    GTP  PG+ +D Y+F+L++E+ KPG  SER++G+F  + +  Y +         +S ++                         G       WC+  +  S  +LQ +LD+AC  G +DCS +QP   CFEP+TV+SHA++A N YYQ S  +  +C F+  +    ++PSY  C+Y
Sbjct:  293 HVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNCLY 475          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.463e-24
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 1
Query:   16 AGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXXXXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQG-IDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVY 501
            +G P  P   ++TYI+ LY+ED + GP SER++G+  P+ ++ Y + +S  S                          +CV KA   D +L   L++AC QG  +C+ IQPG  C+ PN V SHA+FA N YYQ        CDF  TA  T+++PSY  C Y
Sbjct:  300 SGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSSSAALNGSSM----------------FCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E13L2_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 2 OS=Arabidopsis thaliana GN=At5g61130 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.113e-22
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  250 WCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT 516
            WCV K G+SD  LQA+LDYAC  G DC+P +P  +CF P+ V SH  +A+N ++Q   ++P +C+F  TAT T+ +PSY GC +P+  +
Sbjct:   21 WCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSYTGCAFPTSAS 109          
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Match: E13L3_ARATH (Glucan endo-1,3-beta-glucosidase-like protein 3 OS=Arabidopsis thaliana GN=At5g08000 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.722e-22
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  250 WCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT 516
            WCV K G+SD+ LQ +LDYAC  G DC+P  P G+CF P+ V +H  +A+N ++Q   +   +C+F+ TATLT+ +PSY GC +PS  +
Sbjct:   21 WCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVRAHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSAS 109          
The following BLAST results are available for this feature:
BLAST of BQ623299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
E137_ARATH1.126e-6166.08Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT6.222e-3642.33Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E133_ARATH5.279e-2734.86Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1313_ARATH2.620e-2632.09Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E132_ARATH2.218e-2534.62Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E131_ARATH6.453e-2534.91Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E1312_ARATH1.101e-2432.24Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E134_ARATH5.463e-2436.81Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E13L2_ARATH5.113e-2247.19Glucan endo-1,3-beta-glucosidase-like protein 2 OS... [more]
E13L3_ARATH8.722e-2247.19Glucan endo-1,3-beta-glucosidase-like protein 3 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00390 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00390 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623299 ID=BQ623299; Name=BQ623299; organism=Citrus sinensis; type=EST; length=630bp
CACCTTAGATCAATGGCTGGAACTCCATTGATGCCTGGAAAATCTGTGGA
TACATATATTTTTGCTCTCTATGATGAGGACTTGAAGCCTGGCCCTACCT
CTGAACGTTCATTCGGGCTCTTCAAGCCAGACCTTTCAGCAGCATATGAT
GTTGGTATTTCAAAGAGTAGCCAGACTCCATCAGCTCCAGTGACTCCATC
AACTCCAAAAACTCCAACGACTCCATCACCAAAACCAACAGCAGCTGGTT
GGTGTGTGCCCAAGGCCGGCATCTCCGATGCACAACTGCAGGCAAGTCTT
GACTATGCCTGCAGCCAAGGCATCGATTGCAGTCCTATCCAGCCAGGAGG
TGCCTGTTTTGAACCAAATACAGTAGTATCACATGCTGCTTTTGCCATGA
ATCTCTACTACCAGACTTCTGCAAAAAATCCATGGAACTGCGACTTCTCA
AAAACGGCAACACTCACATCCCAAAATCCCAGTTACAATGGATGTGTCTA
TCCTAGTGGGGGTACTTGAAATGGCCAGACGAATTCCCAGTTGATGTTGA
ATAATGGAATGTTAAGTGAAATAAAAGTGATGAATCTAATGGTTCCTATT
TTATAGATAGCTTTAATTGTAAAGGGTTCC
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