BQ623312

Overview
NameBQ623312
Unique NameBQ623312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:800..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL2B4_ARATH (Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 3.887e-91
Identity = 156/208 (75.00%), Postives = 182/208 (87.50%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DGNY + TLHEPIGVAGQI+PWNFP+L+F WKV PALACGNTIVLK+AEQTPLTA Y  KLF EAGLPPGVLN+VSG+G TAGAALASHMDVDKL+FTG  DTGK++  LAA SNLKPVTLELGGKSPFI+F+DAD+D+AVELAHFALF+NQGQCCCAGSRT+VHE+VYDEFVEK+KARA++R+     ++     PQID +QF+
Sbjct:  181 IPADGNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKRVVGDPFRKGIEQGPQIDLKQFE 388
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL2B7_ARATH (Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7 PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 4.022e-88
Identity = 152/207 (73.43%), Postives = 180/207 (86.96%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +PGDG +H+QTLHEPIGVAGQI+PWNFP+L+ +WK+ PALACGNT+VLK+AEQTPL+AL + KL HEAGLP GV+N+VSG+G TAGAA+ASHMDVDK++FTG  D GKI+ ELA+KSNLK VTLELGGKSPFI+ +DADVDQAVELAHFALF+NQGQCCCAGSRT+VHERVYDEFVEKAKARA++R      +      PQ+D EQF
Sbjct:  177 MPGDGPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRNVGDPFKSGIEQGPQVDSEQF 383
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.798e-73
Identity = 125/207 (60.39%), Postives = 162/207 (78.26%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DGN+   T HEP+GV GQI+PWNFP+L+F WK+APAL+CGNT+V+K AEQTPL+AL++A L  EAG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSPFI+F DAD++ A+E+ H ALFY+QGQCC A SR +V E +YDEFV ++  RA + +    L       PQID EQ+
Sbjct:  144 IPSDGNFFTYTRHEPVGVCGQILPWNFPLLMFLWKIAPALSCGNTVVVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPFIVFADADLETALEVTHQALFYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQY 350
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A2_RAT (Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 4.773e-73
Identity = 127/207 (61.35%), Postives = 160/207 (77.29%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DG+Y   T HEPIGV GQI+PWNFP+L+FTWK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG  + GK++QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR +V E +Y+EFV+++  RA RRI            PQID +Q+
Sbjct:  162 IPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQY 368
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A2_MOUSE (Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2)

HSP 1 Score: 273.863 bits (699), Expect = 4.773e-73
Identity = 127/207 (61.35%), Postives = 160/207 (77.29%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQF 622
            +P DG+Y   T HEPIGV GQI+PWNFP+L+FTWK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N++ GYGPTAGAA+ASH+ +DK++FTG  + GK++QE A +SNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR +V E +Y+EFV+++  RA RRI            PQID +Q+
Sbjct:  162 IPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQY 368
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH2_PONAB (Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.389e-72
Identity = 128/208 (61.54%), Postives = 158/208 (75.96%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+            PQ+D  QF+
Sbjct:  161 IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFK 368
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH2_HUMAN (Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.389e-72
Identity = 128/208 (61.54%), Postives = 158/208 (75.96%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G+++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +YDEFVE++ ARA  R+            PQ+D  QF+
Sbjct:  161 IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFK 368
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.814e-72
Identity = 127/208 (61.06%), Postives = 158/208 (75.96%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            VP DGN+   T HEP+GV GQI+PWNFP+++F WK+APAL CGNT+V+K AEQTPL+ALY+  L  EAG PPGV+N+V G+GPTAGAA++ HMD+DK+SFTG  + GK+++E A K+NLK VTLELGGKSP IIF DAD+D+A E AH  LFY+QGQCC AGSR +V E +YDEFV ++  RA +      L       PQID EQFQ
Sbjct:  153 VPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQ 360
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH2_RAT (Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.369e-72
Identity = 129/208 (62.02%), Postives = 157/208 (75.48%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG++   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K AEQTPLTALY+A L  EAG PPGV+N+V G+GPTAGAA+ASH DVDK++FTG  + G ++Q  A  SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E VYDEFVE++ ARA  R+            PQ+D  QF+
Sbjct:  163 IPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFK 370
[Close]
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Match: ALDH2_PIG (Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.369e-72
Identity = 130/208 (62.50%), Postives = 157/208 (75.48%), Query Frame = 2 
Query:    2 VPGDGNYHIQTLHEPIGVAGQIVPWNFPVLLFTWKVAPALACGNTIVLKSAEQTPLTALYLAKLFHEAGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIGWRSLQEWG*TSPQIDPEQFQ 625
            +P DG+Y   T HEP+GV GQI+PWNFP+L+  WK+ PALA GN +V+K +EQTPLTALY+A L  EAG PPGV+N+V GYGPTAGAA+ASH DVDK++FTG  + G ++Q  A KSNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCCCAGSRT+V E +Y EFVE++ ARA  R+            PQID  QF+
Sbjct:  165 LPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVPGYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQGPQIDETQFK 372
The following BLAST results are available for this feature:
BLAST of BQ623312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL2B4_ARATH3.887e-9175.00Aldehyde dehydrogenase family 2 member B4, mitocho... [more]
AL2B7_ARATH4.022e-8873.43Aldehyde dehydrogenase family 2 member B7, mitocho... [more]
AL1A1_HORSE2.798e-7360.39Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
AL1A2_RAT4.773e-7361.35Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Al... [more]
AL1A2_MOUSE4.773e-7361.35Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2... [more]
ALDH2_PONAB1.389e-7261.54Aldehyde dehydrogenase, mitochondrial OS=Pongo abe... [more]
ALDH2_HUMAN1.389e-7261.54Aldehyde dehydrogenase, mitochondrial OS=Homo sapi... [more]
AL1A1_CHICK1.814e-7261.06Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
ALDH2_RAT2.369e-7262.02Aldehyde dehydrogenase, mitochondrial OS=Rattus no... [more]
ALDH2_PIG2.369e-7262.50Aldehyde dehydrogenase, mitochondrial OS=Sus scrof... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00403 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623312 ID=BQ623312; Name=BQ623312; organism=Citrus sinensis; type=EST; length=627bp
TGTCCCTGGTGATGGAAATTACCATATTCAAACTTTACATGAACCAATTG
GCGTTGCTGGCCAGATAGTTCCCTGGAACTTTCCTGTTCTCTTGTTTACT
TGGAAAGTAGCGCCTGCACTAGCTTGTGGTAATACTATTGTTCTAAAGTC
TGCTGAGCAAACGCCTTTGACTGCTCTGTATTTGGCAAAGCTATTCCATG
AGGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCA
ACAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTT
TACAGGACACTGTGATACTGGTAAGATTGTTCAGGAATTGGCTGCAAAAA
GCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATA
ATATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGC
TTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATG
TACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCT
ATGAGGCGTATTGGTTGGCGATCCCTTCAAGAATGGGGGTGAACAAGTCC
TCAAATTGATCCAGAGCAATTTCAAAA
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