BQ623321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_ARATH (Proteasome subunit beta type-4 OS=Arabidopsis thaliana GN=PBG1 PE=1 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.024e-65 Identity = 115/141 (81.56%), Postives = 130/141 (92.20%), Query Frame = 3 Query: 66 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSPCCT 488 QRT PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEISDFQE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG+ YLGMVSMIGV+FED T Sbjct: 22 QRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVAT 162 HSP 2 Score: 24.6386 bits (52), Expect = 1.024e-65 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 2 Query: 491 GFGNHLARAIL 523 GFGNHLAR IL Sbjct: 163 GFGNHLARPIL 173
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus GN=PSMB4 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.457e-36 Identity = 67/137 (48.91%), Postives = 103/137 (75.18%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 470 PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E Sbjct: 42 PITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYE 178
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis GN=psmb4 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 2.708e-35 Identity = 67/153 (43.79%), Postives = 109/153 (71.24%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSPCCTWVLGIILQGP 518 P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+ +D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V +GV +E +P G L P Sbjct: 20 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVDKLGVAYE-APTIATGFGAYLAQP 171
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4) HSP 1 Score: 147.902 bits (372), Expect = 2.708e-35 Identity = 65/137 (47.45%), Postives = 103/137 (75.18%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 470 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYE 178
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus GN=Psmb4 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.033e-35 Identity = 65/137 (47.45%), Postives = 102/137 (74.45%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 470 PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+ +LG V M+GV +E Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYVDMLGVAYE 178
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus GN=Psmb4 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 7.880e-35 Identity = 66/140 (47.14%), Postives = 102/140 (72.86%), Query Frame = 3 Query: 51 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 470 P PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR MY+RR+K +PLWN+ V+GG G+ +LG V M+GV +E Sbjct: 38 PARPITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGESFLGYVDMLGVAYE 177
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_DICDI (Proteasome subunit beta type-4 OS=Dictyostelium discoideum GN=psmB4-1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.324e-33 Identity = 64/136 (47.06%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 66 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFED 473 Q+T P VTGTSV+A+KY G++M +DM SYGS R+ S ER+K G ++++GASGE SDFQ + L++L+ D+ DDG+ L +E+ +YL RV+YN+RN+ +PLWN+LV+ G + G+ +LG V ++G ++D Sbjct: 35 QKTLDPIVTGTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSITNTLNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVVMGYQGGKSFLGKVDLVGTCYKD 170
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_SCHPO (Probable proteasome subunit beta type-4 OS=Schizosaccharomyces pombe GN=SPBC577.10 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.623e-30 Identity = 61/138 (44.20%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGMVSMIGVNF 467 PIQRT P VTG+SV+ALK+ DG+++AAD SYGS R+ VER+ +G ++++GA G+ISD+Q++ R L++L + + + DG +L P +H YL++V+Y RRNK DP WN L++ GV +N + Y+ + G + Sbjct: 32 PIQRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTY 169
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_YEAST (Proteasome component PRE4 OS=Saccharomyces cerevisiae GN=PRE4 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.031e-29 Identity = 64/148 (43.24%), Postives = 100/148 (67.57%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELI---LYDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSPCCT 488 P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+ISD Q + R L +L+ YDN + D +L P + YL VMY RR+K +PLWN++++ GV+ NG ++L V+++GV + T Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYSSPTLAT 177 HSP 2 Score: 20.7866 bits (42), Expect = 1.031e-29 Identity = 8/16 (50.00%), Postives = 10/16 (62.50%), Query Frame = 2 Query: 476 PMLHLGFGNHLARAIL 523 P L GFG H+A +L Sbjct: 173 PTLATGFGAHMANPLL 188
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Match: PSB4_PIG (Proteasome subunit beta type-4 (Fragment) OS=Sus scrofa GN=PSMB4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.078e-27 Identity = 55/113 (48.67%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 60 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS 398 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MYNRR K +PLW + Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154 The following BLAST results are available for this feature:
BLAST of BQ623321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623321 ID=BQ623321; Name=BQ623321; organism=Citrus sinensis; type=EST; length=526bpback to top |