BQ623367

Overview
NameBQ623367
Unique NameBQ623367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 6.157e-94
Identity = 158/236 (66.95%), Postives = 184/236 (77.97%), Query Frame = 3
Query:    3 NGTLNPNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGRSPKCCVSFSAYYNDSVVPCKTCACGCKST--SQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADNCGVSINWHLHTDYNRGWTARVTIFNWGETAFPDWFAAMQFDKAAPGFEAAYSFNGTV--LDGGNDTIFMQGLPGLNFLVGETDGAHPEEDPRVPGKQQSVISFKRQI 698
            NGTLNP+Y+CGPPVRVSPS F DPSG P+NRTAFASWQVVCNIT+PK  SP+CCVSFSAY+NDS+VPCKTCACGC S   ++ CS T              FENR+ L  AWA LK R VPNPMPC DNCGVSINWHL TDY  GWTARVT+FNWGET F DWF A+Q   AAPGFE AYSFN +   ++G N+TIFM+GLPGLN+LV E DG +P ++PR+PGKQQSV+SF +++
Sbjct:  369 NGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQPKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDNCGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKL 604          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.171e-86
Identity = 146/236 (61.86%), Postives = 181/236 (76.69%), Query Frame = 3
Query:    6 GTLNPNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGRSPKCCVSFSAYYNDSVVPCKTCACG-CKS--TSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADNCGVSINWHLHTDYNRGWTARVTIFNWGETAFPDWFAAMQFDKAAPGFEAAYSFNGTVL--DGGNDTIFMQGLPGLNFLVGETDGAHPEEDPRVPGKQQSVISFKRQI 698
            G LNP+Y+CGPP+RVS S FPD SG P+N++AFASWQVVCNIT+P    PKCCVSFS+Y+NDSV+PCKTCACG C S   ++TCSTT              F+NR+ L  AWA LK+R VP+P+PC DNCGVSINWHL TDY  GWTARVT+FNWG+T F DWF A++   AAPGF+ AYSFNG+++  +G N T+ M+GLPGLN+L+ E DG +P ED R+PGKQQSVISF +++
Sbjct:  363 GNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQPT--PPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDNCGVSINWHLATDYRGGWTARVTLFNWGDTDFVDWFTAVELRNAAPGFQKAYSFNGSIIAVNGKNTTVLMEGLPGLNYLLAEKDGKNPSEDFRIPGKQQSVISFTKKL 596          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.089e-82
Identity = 142/237 (59.92%), Postives = 178/237 (75.11%), Query Frame = 3
Query:    6 GTLNPNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGRSPKCCVSFSAYYNDSVVPCKTCACGCKS-TSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADNCGVSINWHLHTDYNRGWTARVTIFNWGETAFPDWFAAMQFDK-AAPGFEAAYSFNGTVL--DGG-NDTIFMQGLPGLNFLVGETDGAHP-EEDPRVPGKQQSVISFKRQI 698
            GTLNP+Y CGPPVRV+P+ +PDPSG P N+++FASWQ+VCNIT+ K   PKCCVSFSA++NDS++PC TCACGC S T +TCS                FENR++L  AW  LKH+T+PNPMPC DNCGVSINWH+ +DY  GWT R+TIFNWGE  FP+WF A+Q  K A  GFE AYSFN ++L  DGG N+TIFM+GLPGL++LV E D   P +++ R+PGKQQSVI F +++
Sbjct:  369 GTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTEIPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWGEIDFPNWFLAVQMKKPALLGFEKAYSFNASLLSVDGGVNNTIFMEGLPGLDYLVAEADEKDPKKKNIRIPGKQQSVIQFSKKL 605          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.595e-79
Identity = 131/232 (56.47%), Postives = 161/232 (69.40%), Query Frame = 3
Query:    3 NGTLNPNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGRSPKCCVSFSAYYNDSVVPCKTCACGCKST-SQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADNCGVSINWHLHTDYNRGWTARVTIFNWGETAFPDWFAAMQFDKAAPGFEAAYSFNGTVLDGGNDTIFMQGLPGLNFLVGETDGAHPEEDPRVPGKQQSVISFKRQ 695
            +G LNP Y+CGPPVRV PS FPDPSG  A   A +SWQVVCNIT+PK ++ +CCVSFSA+YN+S VPC TCACGC    + TC+                F+NR+  A+AWA   H  VP  +PC DNCGVSINWH+ TDY  GWTAR+T+FNW + AF DWF A+   KA PG+E  YSFNGT +   N T+  QGLPG+N+LVG+ +G +P  DP VPGKQQSVISF ++
Sbjct:  381 DGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQASRCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDNCGVSINWHVSTDYKNGWTARLTVFNWRDFAFEDWFVAIDMGKAGPGYENVYSFNGTRVPPSNRTVIFQGLPGMNYLVGQVNGTNPLRDPPVPGKQQSVISFTKK 612          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 1.800e-77
Identity = 124/232 (53.45%), Postives = 161/232 (69.40%), Query Frame = 3
Query:    3 NGTLNPNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGRSPKCCVSFSAYYNDSVVPCKTCACGCKST-SQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADNCGVSINWHLHTDYNRGWTARVTIFNWGETAFPDWFAAMQFDKAAPGFEAAYSFNGTVLDGGNDTIFMQGLPGLNFLVGETDGAHPEEDPRVPGKQQSVISFKRQ 695
            +G +NP Y+CGPP+RV  + FPDPSG  A   A ASWQV+CNIT+PK ++ +CCVSFSA+YNDS +PC TCACGCK   + TC+                F+NR+  A+ WA  KH   P  +PC DNCG+S+NWHL++DY  GW+ARVT+FNWG  A  DWF A+   KA  G+E  YSFNG+ +   N TIF QGLPG+N+L+G T+G +P  DP++PGK QSVISFK++
Sbjct:  371 DGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAARCCVSFSAFYNDSAIPCNTCACGCKDIDTDTCNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDNCGISLNWHLNSDYGNGWSARVTLFNWGNNAVEDWFGALDLGKAGLGYENIYSFNGSRVPPKNQTIFFQGLPGMNYLIGITNGTNPARDPQIPGKMQSVISFKKK 602          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 60/208 (28.85%), Postives = 92/208 (44.23%), Query Frame = 3
Query:   18 PNYQCGPPVRVSPSHFPDPSGGPANRT-AFASWQVVCNITRPKGR-SPKCCVSFSAYYNDSVVPCKTCACGCKSTSQ--TCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADN-CGVSINWHLHTDYNRGWTARVTIFNWG-ETAFPDWFAAMQFDKAAPGFE---AAYSFNGTVLD---GGNDTIFMQGLPGLN 605
            P Y CGP   V PS F   S     +T +  +W + C  ++   R +P CCVS SA+YN+++VPC TC+CGC+++SQ  TC                       +A     L    +   + C  + C + ++WH+ T Y   W  +V I N+     +  W   +Q     P F+     +SFN   L+     NDT  + G+   N
Sbjct:  178 PGYTCGPAKLVKPSRFI--SADKRRKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNSSQAGTCVD-------------------PKIASVVPALGKNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQH----PNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYN 360          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14
Identity = 60/234 (25.64%), Postives = 99/234 (42.31%), Query Frame = 3
Query:   18 PNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKG-RSPKCCVSFSAYYNDSVVPCKTCACGCKSTSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADN-CGVSINWHLHTDYNRGWTARVTIFNWG-ETAFPDWFAAMQFDKAAPGFE---AAYSFNG---TVLDGGNDTIFMQGLPGLNFLVGETDGAHPEEDPRVPGKQQSVISFKR 692
            P Y C P   V P+ F         + A  +W V C  ++    ++P CCVS S++YN ++V C TC+CGC++TSQ  +                 +N               +P  + C  + C V I+WH+  +Y + W  +VTI N+     +  W   +Q     P F+     +SFN    T     NDT  + G+   N L+ +       +   +  K+ S  +F++
Sbjct:  183 PGYTCSPAKIVKPTRFIGTDKRRVTQ-ALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNTSQPGNCVDPKGPRIASVIPNPGKN-------------AYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQH----PNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEK 398          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 45/153 (29.41%), Postives = 70/153 (45.75%), Query Frame = 3
Query:   18 PNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKGR-SPKCCVSFSAYYNDSVVPCKTCACGCKSTSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKH---RTVPNPMPCADN-CGVSINWHLHTDYNRGWTARVTIFNW 461
            P Y C     VSP+ F    G    + A A+W+ VC  ++ +   SPKCCVS SA+Y  ++VPC TC+CGC S+                        +      + + KH     V   + C+D+ C + I+WH+  +Y   W  ++T  N+
Sbjct:  185 PGYSCDNATSVSPTKFSTDKGRRKTQ-ALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSSSHCV---------------------KDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNF 315          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14
Identity = 55/209 (26.32%), Postives = 89/209 (42.58%), Query Frame = 3
Query:   18 PNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRPKG-RSPKCCVSFSAYYNDSVVPCKTCACGCKSTSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPM-PCADN-CGVSINWHLHTDYNRGWTARVTIFNWG-ETAFPDWFAAMQFDKAAPGFE---AAYSFNGTVLDGG---NDTIFMQGLPGLNFLV 614
            P Y CG    V P+ F    G    + A  +W V C  ++    RSP CCVS S++YND++V C TC+CGC++                       E  S    +  +  ++    P+  C  + C + ++WH+  +Y   W  ++T+ N+     +  W    Q     P F+     +SFN   L+     NDT  + G+   N L+
Sbjct:  178 PGYTCGSAKVVRPTKFFSQDGRRTTQ-AHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNNK----------------PGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQH----PSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLL 365          
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14
Identity = 56/203 (27.59%), Postives = 82/203 (40.39%), Query Frame = 3
Query:   18 PNYQCGPPVRVSPSHFPDPSGGPANRTAFASWQVVCNITRP-KGRSPKCCVSFSAYYNDSVVPCKTCACGCKSTSQTCSTTXXXXXXXXXXXXXXFENRSSLARAWADLKHRTVPNPMPCADN-CGVSINWHLHTDYNRGWTARVTIFNWG-ETAFPDWFAAMQ---FDKAAPGFEAAYSFNGTVLDGG-NDTIFMQGLPGLN 605
            P Y CG   RV PS     +       A  +W V C  ++    + P CCVSFS++YND++VPC  CACGC    + C  +                N ++  R             + C  + C V ++WH+  +Y   W A++TI N+     +  W    Q    D     F  ++ +   V  G  NDT    GL   N
Sbjct:  171 PGYTCGR-ARVVPSTVFLTADRRRKTQALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGC-DAHKPCVRSERDGKRLAVTGKKHDANANAHGRGNGVAAAAMAAPLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEVF--SFDYKPVVSYGSINDTAMFYGLKYFN 369          
The following BLAST results are available for this feature:
BLAST of BQ623367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
COBL7_ARATH6.157e-9466.95COBRA-like protein 7 OS=Arabidopsis thaliana GN=CO... [more]
COBL8_ARATH6.171e-8661.86COBRA-like protein 8 OS=Arabidopsis thaliana GN=CO... [more]
COBL9_ARATH1.089e-8259.92COBRA-like protein 9 OS=Arabidopsis thaliana GN=CO... [more]
CBL10_ARATH5.595e-7956.47COBRA-like protein 10 OS=Arabidopsis thaliana GN=C... [more]
CBL11_ARATH1.800e-7753.45COBRA-like protein 11 OS=Arabidopsis thaliana GN=C... [more]
COBL2_ARATH2.314e-1628.85COBRA-like protein 2 OS=Arabidopsis thaliana GN=CO... [more]
COBL1_ARATH1.658e-1425.64COBRA-like protein 1 OS=Arabidopsis thaliana GN=CO... [more]
COBL6_ARATH2.829e-1429.41COBRA-like protein 6 OS=Arabidopsis thaliana GN=CO... [more]
COBL1_ORYSJ4.825e-1426.32COBRA-like protein 1 OS=Oryza sativa subsp. japoni... [more]
COBL6_ORYSJ6.302e-1427.59COBRA-like protein 6 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00458 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00458 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623367 ID=BQ623367; Name=BQ623367; organism=Citrus sinensis; type=EST; length=704bp
TCAACGGGACACTCAACCCTAATTATCAATGTGGCCCTCCAGTGAGGGTG
AGTCCCAGCCATTTCCCGGACCCCAGTGGTGGTCCAGCAAATAGAACTGC
TTTTGCTAGCTGGCAAGTTGTGTGCAATATTACACGGCCCAAGGGAAGGA
GCCCTAAATGCTGTGTATCATTTTCTGCCTATTACAATGACTCCGTTGTC
CCCTGCAAAACTTGTGCATGTGGGTGCAAGAGTACAAGCCAAACTTGTAG
TACTACTGCTCCTGCTATTCTTCTTCCGCCTGAAGCTCTTCTTCTTCCCT
TTGAGAATCGTTCTTCTCTGGCAAGAGCTTGGGCGGATCTTAAACATCGA
ACAGTGCCAAACCCAATGCCCTGTGCAGATAATTGTGGTGTCAGTATCAA
CTGGCATTTACATACAGACTATAATCGTGGATGGACTGCAAGAGTGACAA
TCTTCAACTGGGGTGAAACTGCTTTTCCTGATTGGTTTGCTGCGATGCAG
TTCGACAAAGCAGCTCCGGGTTTTGAAGCAGCATACTCATTCAATGGAAC
TGTTTTGGATGGCGGCAATGATACTATATTCATGCAGGGTCTTCCGGGAT
TGAACTTTCTTGTGGGTGAGACAGATGGAGCCCATCCTGAGGAGGATCCT
AGAGTGCCTGGGAAACAACAGTCAGTGATCTCGTTTAAAAGACAGATACC
CCTG
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