BQ623372

Overview
NameBQ623372
Unique NameBQ623372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig567 contig Csv1_Contig567:85..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.759e-23
Identity = 53/92 (57.61%), Postives = 65/92 (70.65%), Query Frame = 3
Query:   51 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 326
            LGG R+V    N+ EI +LARFAV+EHNKKQN+ L+F            GTLY ITLEA +GGQKK++EAKVWEKPW+ FKEL+EF  V  +
Sbjct:    4 LGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFKHVGDA 95          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 4.910e-23
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 3
Query:    6 LIALSSDLRRKQWPTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 341
            LIA       ++   +GGV +V A  N+ E+ +LARFAVDEHNKK+N+ L+F            GTL+ +TLE +E GQKKL+EAKVW KPW+ FKEL+EF P + + + T+
Sbjct:   22 LIASDLGFCNEEMALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITS 133          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 4.595e-21
Identity = 53/94 (56.38%), Postives = 60/94 (63.83%), Query Frame = 3
Query:   45 PTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 326
            P LGGV  V    N+  +V+LARFAV EHNKK NS L+F            GTLY  T+E  EG  KKL+EAKVWEKPWM FKEL+EF PV  S
Sbjct:   45 PVLGGVEPV-GNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDAS 137          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 6.636e-20
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 3
Query:    3 LLIALSSDLRRKQWPTLGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEF 308
            L I  S +   ++   LGGV ++    N+ EI +LARFA+ EHNK+QN  L+F            GT+Y +TLEA EG Q K FEAKVW KPWM FK+L+EF
Sbjct:   19 LAICRSEEKSTEKTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEF 120          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT12_ORYSJ (Cysteine proteinase inhibitor 12 OS=Oryza sativa subsp. japonica GN=Os01g0270100 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.132e-19
Identity = 46/96 (47.92%), Postives = 63/96 (65.62%), Query Frame = 3
Query:   51 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSST 338
            LGG  +  + AN+ E   LARFAVDEHNK++N+ L+F            GTL+ +TLEA+E G+KK++EAKVW KPW+ FKEL+EF     + + T
Sbjct:   48 LGGAHDAPSAANSVETDALARFAVDEHNKRENALLEFVRVVEAKEQVVAGTLHHLTLEALEAGRKKVYEAKVWVKPWLDFKELQEFRNTGDATTFT 143          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 3
Query:   54 GGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSS 335
            GG+++V A  N+ ++  LARFAV+EHN+K N+ L F            GT+Y +T+E  +G  KKL+EAKVWEKPW  FK+L+EF PV +  S+
Sbjct:   42 GGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVEEGASA 135          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.211e-18
Identity = 45/75 (60.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:   93 EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPV 317
            EI  LARFAVDEHNKKQN+ L+F            G +Y ITLEA  GG KK +EAKVW KPW  FKEL+EF PV
Sbjct:    3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPV 77          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.998e-16
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 3
Query:   51 LGGVRNVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVA 320
            LGGV++  A   N  E + LARFAV EHN K N+ L+F            G ++  T+E  EGG KKL+EAKVWEK W  FK+L+EF P A
Sbjct:   17 LGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPAA 107          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT1_ARATH (Cysteine proteinase inhibitor 1 OS=Arabidopsis thaliana GN=CYS1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16
Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = 3
Query:   51 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFN 311
            +GGVR+++A AN+ ++ +LARFAVDEHNK +N  L++            GT++ +T+E  +G   K++EAKV EK W   K+L+ FN
Sbjct:   10 VGGVRDIDANANDLQVESLARFAVDEHNKNENLTLEYKRLLGAKTQVVAGTMHHLTVEVADGETNKVYEAKVLEKAWENLKQLESFN 96          
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.768e-15
Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 3
Query:   51 LGGVRNVEATANN-QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXXGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 326
            LGG  + +   N  +EI ++A FAV EHN+++N+ L+             G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   45 LGGFSDSKNDWNGGKEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
The following BLAST results are available for this feature:
BLAST of BQ623372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYTI_VIGUN3.759e-2357.61Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ARATH4.910e-2347.32Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYT1_ORYSJ4.595e-2156.38Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT3_ARATH6.636e-2048.04Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT12_ORYSJ1.132e-1947.92Cysteine proteinase inhibitor 12 OS=Oryza sativa s... [more]
CYT1_MAIZE5.617e-1946.81Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYTA_HELAN6.211e-1860.00Cysteine proteinase inhibitor A OS=Helianthus annu... [more]
CYT1_HORVU1.998e-1648.35Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT1_ARATH9.916e-1642.53Cysteine proteinase inhibitor 1 OS=Arabidopsis tha... [more]
CYT7_ARATH3.768e-1543.01Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00463 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00463 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623372 ID=BQ623372; Name=BQ623372; organism=Citrus sinensis; type=EST; length=569bp
ATCTTCTCATCGCTTTATCATCAGACTTACGCAGAAAACAATGGCCTACA
TTGGGCGGTGTTCGTAACGTTGAAGCAACAGCCAACAATCAGGAGATCGT
TAATCTCGCACGCTTCGCTGTGGATGAGCATAACAAGAAGCAGAATTCAA
ATCTGCAATTTGTAAAAGTTGTAAGTGCGAAGCAGCAAGTGGTTTCAGGG
ACTCTGTACGACATCACCTTGGAGGCTGTTGAAGGAGGTCAGAAGAAACT
TTTTGAAGCTAAGGTCTGGGAGAAGCCTTGGATGCAATTCAAGGAGTTGA
AAGAATTCAATCCTGTTGCTCAGTCTCACTCCTCAACCGCTTAGCTTGTG
GTGACTGAAGATGACATCTGTAGCTTGCAATGGATCAAACAAAGAGACAG
TATCAATAAGAATGGAGCTATAACCATGTTCAGATTATAAAAATAAATGT
AACCGGACTTATGAGTTTGGTTCTTTAATCTTTTGCAAGTTATGTGTCGA
TTATTTATGGTAGTAGCTGCAACTCAGCGCAACTTTTATAACTGTGTGAA
AAATAATTGAAATGACCTT
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