BQ623376

Overview
NameBQ623376
Unique NameBQ623376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1379 contig Csv1_Contig1379:28..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.018e-32
Identity = 66/152 (43.42%), Postives = 93/152 (61.18%), Query Frame = 3
Query:   30 AKNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            A+  +L G+LETE+E K SA  FH + + RPHH S  TPD + G ELHEG+WGK G+++ W Y HDG                N  TFKV+EG L+++Y SF  T+Q  PK GE   +A W ++YEK SE+V  P+ ++   +E++K I+ H
Sbjct:    2 AEASSLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYEKISEEVAHPETLLQFCVEISKEIDEH 153          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30
Identity = 61/151 (40.40%), Postives = 89/151 (58.94%), Query Frame = 3
Query:   33 KNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            ++ +L G+LET++E K SA  FH + + RPHH S  TP  +QG ELHEG+WGK G+++ W Y HDG                N  TF+VIEG LL +Y SF +T+Q  PK G    +  W ++YEK  + V  P+  ++  +E++K I+ H
Sbjct:   16 ESSSLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKIDDKVAHPETFLDFCVEVSKEIDEH 166          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.652e-29
Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 3
Query:   42 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++   +E++K I+ H
Sbjct:   21 SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEH 168          

HSP 2 Score: 124.405 bits (311), Expect = 5.143e-28
Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 3
Query:   42 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            +L G+LET++E K SA  FH + + +PHH S  +P ++QG +LHEG+WG+ G+++ W Y HD                 N  TF+VI+G L+ +Y SF +T+Q  PK G    +  W ++YEK SE+V  P+ ++   +E++K I+ H
Sbjct:  183 SLVGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYVHDREAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYEKISEEVAHPETLLQFCVEVSKEIDEH 330          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.353e-28
Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 3
Query:   12 EYLF*SAKNMTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            E+L    + +  +  LETE+E K SA  FH + + +PHH S  TP ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W  +YEK +E+V  P+ ++  A+E++K I+ H
Sbjct:  154 EHLLSEEEEVKTTETLETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKINEEVAHPETLLQFAVEVSKEIDEH 311          

HSP 2 Score: 124.79 bits (312), Expect = 3.938e-28
Identity = 56/148 (37.84%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   42 TLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            +L G+LETE+E K SA  FH + + +PHH S  +P ++Q  +LHEG+WG  G+++ W Y HDG                N  TF+VIEG L+ +Y SF +T+Q  PK G    +  W ++YEK S++V  P+ ++   +E+++ I+ H
Sbjct:    8 SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWHLEYEKISDEVAHPETLLQFCVEVSQEIDEH 155          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: ML165_ARATH (MLP-like protein 165 OS=Arabidopsis thaliana GN=MLP165 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13
Identity = 42/145 (28.97%), Postives = 73/145 (50.34%), Query Frame = 3
Query:   54 QLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAI-PK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            ++E +++ K  A  FH  +  R  H    T  +++G +L EGEWGK G+++ W    DG                N    +V+EG L  +Y SF  T++ + PK G    + +W +KYE+  ++V  P  ++   +E+TK I+ +
Sbjct:    5 EIEVDVDIKTRADKFHKFIR-RSQHVPKAT-HYIKGCDLLEGEWGKVGSILLWKLVFDGEPRVSKDMIEVIDEEKNVIQLRVLEGPLKKEYKSFLKTMKVMSPKHGGPGSVVKWNMKYERIDQNVDHPNRLLQFFVEVTKEIDQY 147          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana GN=MLP328 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.029e-12
Identity = 39/148 (26.35%), Postives = 67/148 (45.27%), Query Frame = 3
Query:   39 MTLSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPKGEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            M  SG   TE+  K SA   +       H F +    H+QGV +H+GEW   G +  W Y  DG                 + TF+ +EGH++++   + V  Q I K     + + T+ +EK+++D+P+P   +     +   ++ H
Sbjct:    1 MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSHGAIKIWNYTCDG-KPEVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITMIWEKQNDDMPEPSNYMKFVKSLAADMDDH 147          
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Match: ML168_ARATH (MLP-like protein 168 OS=Arabidopsis thaliana GN=MLP168 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 42/147 (28.57%), Postives = 73/147 (49.66%), Query Frame = 3
Query:   45 LSGQLETELEAKVSASIFHDVLSCRPHHFSNMTPDHVQGVELHEGEWGKPGTVITWTYKHDGVTXXXXXXXXXXXXXXNSTTFKVIEGHLLDKYSSFYVTVQAIPK-GEHSCLARWTIKYEKKSEDVPDPQGIVNLAIEMTKGIEAH 482
            +  ++E ++E K +A  F  + S R  H S  T  +VQG +L EGEWG+ G+++ W    DG                N   ++V+EG L ++Y+ F  T++  PK G    + +W +KYE+  E V   + ++   +E    I+ +
Sbjct:    2 VEAEVEVDVEIKSTADKFF-MFSRRSQHASKATR-YVQGCDLLEGEWGEVGSILLWKLTVDGEPKVSKDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPKQGGSGSVVKWNLKYERIDEKVAHLERLLQFFVECVNEIDQY 146          
The following BLAST results are available for this feature:
BLAST of BQ623376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MLP43_ARATH2.018e-3243.42MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP... [more]
MLP31_ARATH3.221e-3040.40MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP... [more]
MLP28_ARATH4.652e-2939.19MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP... [more]
MLP34_ARATH1.353e-2837.34MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP... [more]
ML165_ARATH7.971e-1328.97MLP-like protein 165 OS=Arabidopsis thaliana GN=ML... [more]
ML328_ARATH3.029e-1226.35MLP-like protein 328 OS=Arabidopsis thaliana GN=ML... [more]
ML168_ARATH8.813e-1228.57MLP-like protein 168 OS=Arabidopsis thaliana GN=ML... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00467 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00467 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623376 ID=BQ623376; Name=BQ623376; organism=Citrus sinensis; type=EST; length=659bp
CATTTCCTTGTGAATATCTATTTTAATCCGCTAAAAACATGACCCTATCT
GGTCAGTTGGAGACTGAATTAGAGGCCAAGGTTTCGGCTAGTATTTTTCA
TGATGTGCTTAGCTGCAGGCCACACCATTTCTCCAATATGACTCCTGATC
ATGTACAAGGTGTTGAACTGCACGAAGGTGAATGGGGAAAACCAGGCACT
GTCATTACCTGGACTTATAAGCATGATGGGGTTACAGAAATTGCCAAGGA
GATAATTGAAGAAATAGATGACGAAAAGAACTCGACAACTTTTAAAGTAA
TTGAAGGGCATCTACTGGACAAGTACAGCAGCTTCTATGTTACCGTTCAA
GCCATTCCGAAGGGTGAACATAGTTGCTTGGCTCGTTGGACTATCAAGTA
TGAGAAGAAGAGCGAGGACGTGCCTGATCCCCAAGGAATTGTAAATTTGG
CAATCGAAATGACCAAAGGTATCGAAGCCCATCATCCCCCAAAGCAGGCA
TAGATCCATGCATTACTGCCTTAGGTTATGTCTGTGTTTGATTTGGTCAT
AAATAAAGTGCTTCTCTAGAAGTGCTTGTGTTTGTAATCTGGCTTGGGTG
TGTCTTCTTGGTTGTACCACAACTAATAAGCTTGTATTATGAACGAAAAT
TTGTGCTTT
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