BQ623377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.388e-31 Identity = 85/194 (43.81%), Postives = 109/194 (56.19%), Query Frame = 3 Query: 21 SQLQSPT-GIQMRQNMNQQLRSSYPASSSPVR-PSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERNTVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSPSIRAGQFGFEEQQCHLNSGGSEMLPAWVEQLYMEQEQLV 596 S + SP+ QM QNMNQ YP SSPVR P G ++S A A AV+ +RS AFAKRS SF +T A SNL+DWGSP+GKL+WG++ E+LNK+R+S SFGI N + A + DEPDVSWV SLV+DS + FG E+ + +W EQ+Y E+EQ V Sbjct: 420 SYVSSPSRNSQMGQNMNQH----YP--SSPVRQPPSQHGFESSAAAAVAVMKARSTAFAKRSLSF--------------KPATQAAPQSNLSDWGSPNGKLEWGMKGEELNKMRRSVSFGIHGNNNNNAARD-----YRDEPDVSWVNSLVKDSTVVSERSFGMNER---------VRIMSWAEQMYREKEQTV 579
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.667e-30 Identity = 86/200 (43.00%), Postives = 114/200 (57.00%), Query Frame = 3 Query: 12 ASASQLQSPTGIQMRQNMNQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERNTVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPAT--ADEPDVSWVQSLVRDSPSIRAGQFGFEEQQCHLNSGGSE---MLPAWVEQLYMEQEQLV 596 AS QLQSP+ MN YP SSPVR G ++S A+AAAV+++RS+AFAKRS SF A + SN++DWGSP+GKL+WG+QR++LNKLR+SASFGI N + S PA +DEPDVSWV SLV+++ R E +N S LP+W EQ+Y++ EQ + Sbjct: 431 ASVMQLQSPS---RHSQMNH-----YP--SSPVRQPPPHGFESSAAMAAAVMNARSSAFAKRSLSF-----------------KPAPVASNVSDWGSPNGKLEWGMQRDELNKLRRSASFGIHGNN----NNSVSRPARDYSDEPDVSWVNSLVKENAPERVN----ERVGNTVNGAASRDKFKLPSWAEQMYIDHEQQI 595
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.195e-26 Identity = 82/190 (43.16%), Postives = 107/190 (56.32%), Query Frame = 3 Query: 39 TGIQMRQNM-NQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAK-RSQSFIERNT-VSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSPSIRAGQFGFEEQQCHLNSGGSEMLPAWVEQLYMEQEQLVA 599 +G+Q+R+++ N QL S+ SSSPV + F +D+S AVL+SR+A FAK RSQSFIERN ++ H SS +T L DWGS DGKLDW VQ ++L KLRKS SF +R+ G T +EPDVSWV+ LV++ R + P W+EQ YME EQ VA Sbjct: 451 SGLQIRRSVINPQLHSN-SLSSSPVGANSLFSMDSS-----AVLASRAAEFAKQRSQSFIERNNGLNHHPAISSMTTTC------LNDWGSLDGKLDWSVQGDELQKLRKSTSFRLRAGGMESRLPNEGT--GLEEPDVSWVEPLVKEPQETR-------------------LAPVWMEQSYMETEQTVA 607
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.058e-25 Identity = 67/129 (51.94%), Postives = 84/129 (65.12%), Query Frame = 3 Query: 90 PASSSPVRPSQSFGIDTSGAIAAAVLSSRSAAFAKRSQSFIERN-TVSRHSGFSSPDSTAAVMPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRD 473 P S + +FG+D S +A A++SSR++AFAKRSQSFI+R SP +T A PS L+DWGSPDGKLDWGVQ ++L+KLRKSASF R + +T A A EPDVSWV SLV+D Sbjct: 462 PTSPMVGGANTAFGLDHS--MAKAIMSSRASAFAKRSQSFIDRGGRAPAARSLMSPATTGA--PSILSDWGSPDGKLDWGVQGDELHKLRKSASFAFRGQ----SAMPVATHAAAAEPDVSWVNSLVKD 582
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.185e-12 Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 66 NQQLRSSYPASSSPVRPSQSFGIDTSGAIAAAVLSSRS-------AAFAKRS-QSFIERNTVSRHSGFSSPDSTAAV---MPSNLADWGSPDGKLDWGVQREDLNKLRKSASFGIRSNGGSVATSETSTPATADEPDVSWVQSLVRDSP 479 NQQL P+ SS ++ S GI + G ++ + S S AA A+R Q R+ SR G S+ ++ V + S+ + WGSP G DWGV E+L KLR+S+SF +RS G D+PD+SWV +LV++SP Sbjct: 573 NQQL----PSHSSLLQAS--LGISSPGRMSPRCVESGSPMNSHLAAALAQREKQQQTMRSLSSRDLGPSAARASGVVGSPLSSSWSKWGSPSGTPDWGVNGEELGKLRRSSSFELRSGG--------------DDPDLSWVHTLVKESP 701 The following BLAST results are available for this feature:
BLAST of BQ623377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623377 ID=BQ623377; Name=BQ623377; organism=Citrus sinensis; type=EST; length=614bpback to top |