BQ623379

Overview
NameBQ623379
Unique NameBQ623379
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig556 contig Csv1_Contig556:702..1394. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: SKU5_ARATH (Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.513e-76
Identity = 138/205 (67.32%), Postives = 164/205 (80.00%), Query Frame = 3
Query:   51 VEYRSLILPPRLD*PDWFKVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDI--SAATAITGDRLKMFFTLLMTMCAMLVLFH 659
            + +++   P RL   D  KVK  YKLDFP +P+TGP ++ TS+INGTYRGFMEV+LQNNDTKM +YHMSGYAFFVVGMDYGEWT+NSRGTYNKWDGIAR+T QVYPGAW+AIL+SLDN G WNLRTENLDSWYLGQETYVRVVNP+  NKTEF  PDN L+CGALS LQKP+ +  SA+ +I    L M   ++M +  M++L H
Sbjct:  388 ISFKNPSTPIRL--ADKLKVKDVYKLDFPKRPLTGPAKVATSIINGTYRGFMEVVLQNNDTKMQSYHMSGYAFFVVGMDYGEWTENSRGTYNKWDGIARSTIQVYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCGALSKLQKPQKVSSSASKSIGFTSLSM---VVMALVMMMMLQH 587          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.893e-71
Identity = 106/184 (57.61%), Postives = 142/184 (77.17%), Query Frame = 3
Query:  105 KVKGAYKLDFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDISAATAITGDRLKMFFTLLMTMCAMLVLF 656
            KVKGAYKLDFP +P   P R++ S+IN TY+GF++V+ QNNDTK+ ++H+ GY+FFVVGMD+G W+++ +G+YN WD I+R+T +VYPG WTA+L+SLDNVG+WN+R ENLD WYLG+ETY+R+ NPE   KTE   PDN L+CGAL +LQK +  SAAT+I    LK+   LLM + A +  F
Sbjct:  407 KVKGAYKLDFPDRPFNRPLRLDRSMINATYKGFIQVVFQNNDTKIQSFHVDGYSFFVVGMDFGIWSEDKKGSYNNWDAISRSTIEVYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCGALKNLQKEQHHSAATSILNGHLKLM--LLMVLLASVFRF 588          

HSP 2 Score: 48.521 bits (114), Expect = 1.893e-71
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 2
Query:    2 RNKPPEMIDGKRRATLSGISFVNPSTPIRLA 94
            R+ PP +I+G  RATL+GISFVNPSTP+RLA
Sbjct:  373 RSLPPTIINGALRATLNGISFVNPSTPVRLA 403          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 7.750e-67
Identity = 98/189 (51.85%), Postives = 141/189 (74.60%), Query Frame = 3
Query:   96 DWFKVKGAYKLDFPTKPVTGP-PRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDISAAT-AITGDRLKMFFTLLMTMCAMLVLF 656
            D  KVKG Y LDFP +P+    PR+ +S+IN TY+GF++VI QNNDTK+ ++H+ GYAF+VV MD+G W+++   +YN WD +AR+T +VYPGAWTA+L+SLDNVG+WN+R ENLD WYLGQETY+R++NPE    TE   P+N ++CGAL  +QK +  S+AT ++T  +L + F+++M + +    F
Sbjct:  403 DDHKVKGDYMLDFPDRPLDEKLPRLSSSIINATYKGFIQVIFQNNDTKIQSFHIDGYAFYVVAMDFGIWSEDRNSSYNNWDAVARSTVEVYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCGALQAMQKEQHHSSATKSMTNGQLILIFSMMMVLLSSFSSF 591          

HSP 2 Score: 49.2914 bits (116), Expect = 7.750e-67
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 2
Query:    2 RNKPPEMIDGKRRATLSGISFVNPSTPIRLA 94
            R+ PP  I+GK RATL+GISFVNPSTP+RLA
Sbjct:  372 RSLPPTKINGKLRATLNGISFVNPSTPMRLA 402          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.305e-34
Identity = 58/145 (40.00%), Postives = 94/145 (64.83%), Query Frame = 3
Query:  129 DFPTKPVTGPPRMETSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKP 563
            D PT       ++E +V+N T+R F+EV+ +N++  + ++H+ GY+FF V ++ G WT   R  YN  D ++R T QVYP  W AIL++ DN G+WN+R+EN +  YLGQ+ Y  V++PE + + E+ +P+ +L CG + +  KP
Sbjct:  404 DDPTPEQIKNIKIEPNVLNITHRTFVEVVFENHEKSVQSWHLDGYSFFSVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENTERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKNTPKP 548          

HSP 2 Score: 31.187 bits (69), Expect = 6.305e-34
Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 2
Query:   23 IDGKRRATLSGISFVNPSTPIRLA 94
            +DGK R  L+G+S   P TP++LA
Sbjct:  364 VDGKLRFALNGVSHTEPETPLKLA 387          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: ASOL_TOBAC (L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.318e-32
Identity = 60/157 (38.22%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  117 AYKLDFPTKPVTGPPR---METSVINGTYRGFMEVILQNNDTKMHAYHMSGYAFFVVGMDYGEWTDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIWNLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFCGALSHLQKPEDISA 578
            A+K D         P    + T+V N TYR F+E+I +N++  +  YH+ GY+FF V ++ G W+   R  YN  DG++R   QVYP +W AI+++ DN G+WNLR+E  +  YLG++ Y  V++P  + + E+ IPDN   CG +  L  P    A
Sbjct:  398 AFKYDLMADEAPADPSKLTIATNVKNATYRNFVEIIFENHEKTIRTYHLDGYSFFAVAVEPGRWSPEKRKNYNLVDGLSRNNIQVYPNSWAAIMLTFDNAGMWNLRSEMWEKTYLGEQLYFSVLSPSRSLRDEYNIPDNHPLCGIVKGLSMPAPYKA 554          

HSP 2 Score: 25.409 bits (54), Expect = 4.318e-32
Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2
Query:   23 IDGKRRATLSGISFVNPSTPIRL 91
            + GK R  L+GIS  N  TP++L
Sbjct:  366 VGGKLRYGLNGISHTNGETPLKL 388          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: LAC12_ORYSJ (Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 3
Query:  105 KVKGAYKLDFPTKPV-----TGPPRMETSVINGT------YRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTD-NSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 416
            K KG Y  +FP  P+     TG P   T+V+NGT      Y   +E+++Q+      + H  H+ G+ FFVVG  +G +   N    +N +D + R T  V  G W AI    DN G+W
Sbjct:  416 KSKGVYASNFPYYPLNPFNYTGTPPNNTNVMNGTKVLVLPYGANVELVMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPINDPAKFNLYDPVERNTVGVPAGGWVAIRFHADNPGVW 534          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: LAC22_ORYSJ (Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 51/165 (30.91%), Postives = 76/165 (46.06%), Query Frame = 3
Query:   99 WFKVKGAYKLDFPTKPV-------TGPPRMETSVINGT------YRGFMEVILQNN---DTKMHAYHMSGYAFFVVGMDYGEWTDN-SRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW--NLRTENLDSWYLGQETYVRVVNPEATNKTEFPIPDNALFC 536
            ++ + G +  DFP  P+       +GP  ++T  +NGT      Y   ++V+LQ+      + H  H+ G+ FFVVG   G +    S  T+N  D I R T  V  G WTAI    DN G+W  +   E   SW  G +    V N +  ++T  P P +   C
Sbjct:  404 YYNIPGVFTEDFPATPLHKFNYTGSGPKNLQT--MNGTRVYRLPYNASVQVVLQDTGIISPESHPIHLHGFNFFVVGKGVGNYNPRTSPSTFNLIDPIERNTIGVPTGGWTAIRFRSDNPGVWFMHCHFEVHTSW--GLKMAFVVDNGKRPSETLIPPPKDLPQC 564          
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11
Identity = 41/116 (35.34%), Postives = 54/116 (46.55%), Query Frame = 3
Query:  114 GAYKLDFPTKPV-----TGPPRMETSVINGT------YRGFMEVILQNND---TKMHAYHMSGYAFFVVGMDYGEWTDNSR-GTYNKWDGIARTTTQVYPGAWTAILVSLDNVGIW 416
            G Y  DFP  P+     TG P   T+V NGT      Y   +EV+LQ+      + H  H+ G+ FFVVG   G +  +     +N  D + R T  V  G W AI    DN G+W
Sbjct:  423 GVYTADFPASPLEPFNYTGTPPNNTNVSNGTRVVVLPYNASVEVVLQDTSILGAESHPLHLHGFDFFVVGQGTGNYDPSKHPAEFNLVDPVQRNTVGVPAGGWVAIRFFADNPGVW 538          
The following BLAST results are available for this feature:
BLAST of BQ623379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SKU5_ARATH2.513e-7667.32Monocopper oxidase-like protein SKU5 OS=Arabidopsi... [more]
SKS1_ARATH1.893e-7157.61Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKS2_ARATH7.750e-6751.85Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
ASOL_BRANA6.305e-3440.00L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
ASOL_TOBAC4.318e-3238.22L-ascorbate oxidase homolog OS=Nicotiana tabacum P... [more]
LAC12_ORYSJ1.659e-1134.45Laccase-12/13 OS=Oryza sativa subsp. japonica GN=L... [more]
LAC22_ORYSJ8.235e-1130.91Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC10_ORYSJ8.235e-1135.34Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00470 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00470 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623379 ID=BQ623379; Name=BQ623379; organism=Citrus sinensis; type=EST; length=694bp
GAGAAACAAGCCACCAGAAATGATTGACGGAAAACGGCGGGCAACTCTTA
GTGGAATATCGTTCGTTAATCCTTCCACCCCGATTAGACTAGCCCGACTG
GTTCAAAGTGAAGGGAGCTTATAAGCTTGATTTTCCCACTAAGCCAGTTA
CAGGACCACCTCGGATGGAAACATCGGTAATTAATGGAACGTATAGGGGA
TTTATGGAAGTCATCCTACAGAACAATGACACCAAGATGCATGCATATCA
CATGAGTGGTTATGCATTTTTTGTCGTCGGGATGGATTATGGTGAGTGGA
CAGATAACAGCAGGGGCACATATAACAAGTGGGATGGTATTGCCCGCACC
ACAACACAGGTCTATCCTGGCGCATGGACTGCAATCTTGGTATCACTTGA
CAATGTGGGGATCTGGAATCTCAGAACAGAAAACCTTGACTCGTGGTATC
TTGGCCAAGAAACATACGTTAGAGTAGTCAATCCGGAGGCTACAAATAAA
ACTGAGTTTCCCATACCGGACAATGCCCTCTTTTGCGGTGCCCTCAGTCA
CCTGCAGAAGCCAGAAGACATCTCTGCAGCAACCGCAATTACTGGTGATA
GATTGAAGATGTTCTTCACGCTGCTGATGACCATGTGTGCTATGCTGGTA
CTCTTTCACTAAGCAATTTCCTTTAGGATGTTTTCTCTTTCCCC
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