BQ623394

Overview
NameBQ623394
Unique NameBQ623394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:760..1353. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 3.273e-89
Identity = 163/184 (88.59%), Postives = 168/184 (91.30%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPGPAGE 563
            KIAVGAA+GLEYLHEKA+PHIIHRDIKSSNVL+F+DDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH LPRGQQSLVTWATPKLSEDKV+QCVDARLGGDYPP           LCVQYEADFRPNMSIVVKALQPLLNAR    GE
Sbjct:  179 KIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARAVAPGE 362          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 315.849 bits (808), Expect = 9.853e-86
Identity = 158/182 (86.81%), Postives = 165/182 (90.66%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPGPA 557
            KIAVGAAKGLEYLHEKA PHIIHRDIKSSN+L+FDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQL++KSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATP+LSEDKV+QCVDARL  DYPP           LCVQYEADFRPNMSIVVKALQPLL  RP P+
Sbjct:  174 KIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLNTDYPPKAIAKMAAVAALCVQYEADFRPNMSIVVKALQPLL-PRPVPS 354          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 2.433e-76
Identity = 137/182 (75.27%), Postives = 157/182 (86.26%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARP-GP 554
            KIA GAAKGLE+LHEK  P I+HRD++SSNVL+FDD VAK+ADF+L+N + D AARLHSTRVLGTFGYHAPEYAMTGQ+  KSDVYSFGVVLLELLTGRKPVDHT+P+GQQSLVTWATP+LSEDKV+QC+D +L  D+PP           LCVQYEADFRPNM+IVVKALQPLLN++P GP
Sbjct:  180 KIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPAGP 361          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.541e-41
Identity = 90/183 (49.18%), Postives = 118/183 (64.48%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPGPA 557
            KIA GAAKGLE+LH+KA+P +I+RD KSSN+L+ +    K++DF L+   P       STRV+GT+GY APEYAMTGQL  KSDVYSFGVV LEL+TGRK +D  +P G+Q+LV WA P  ++  K  +  D RL G +P            +C+Q +A  RP ++ VV AL  L N    P+
Sbjct:  189 KIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDPS 371          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.106e-39
Identity = 87/182 (47.80%), Postives = 116/182 (63.74%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK-VRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPGP 554
            KIA GAA+GLEYLH++  P +I+RD+K SN+L+ +D   K++DF L+   P       STRV+GT+GY AP+YAMTGQL  KSD+YSFGVVLLEL+TGRK +D+T  R  Q+LV WA P   + +   + VD  L G YP            +CVQ +   RP +S VV AL  L +++  P
Sbjct:  206 KIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDP 387          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.485e-38
Identity = 91/184 (49.46%), Postives = 114/184 (61.96%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADP-HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPGPA 557
            K+A+ AAKGL +LH  +DP  +I+RDIK+SN+L+  D  AK++DF L+   P       STRV+GTFGY APEY  TG LNA+SDVYSFGVVLLELL GR+ +DH  P  +Q+LV WA P L S  KV   VD RL   Y P            C+ +E   RP M  VV+AL  L ++   PA
Sbjct:  174 KVALDAAKGLAFLH--SDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQDSVVKPA 355          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.704e-37
Identity = 83/176 (47.16%), Postives = 117/176 (66.48%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLL 536
            K+A+G AK LEYLHE   P I+HR+ KS+N+L+ ++    ++D  L+   P+   ++ ST+V+G+FGY APE+A++G    KSDVY+FGVV+LELLTGRKP+D +  R +QSLV WATP+L + D + + VD  L G YP            LC+Q E +FRP MS VV+ L  L+
Sbjct:  499 KVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQV-STQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLVRLV 673          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.443e-36
Identity = 84/181 (46.41%), Postives = 115/181 (63.54%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED-KVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLNARPG 551
            K+A+GAAKGL +LH+ A   +I+RD K++N+L+  +  +K++DF L+   P       ST+V+GT GY APEY  TG+L AKSDVYSFGVVLLELL+GR+ VD +    +QSLV WATP L +  K+ + +D RLGG YP             C+  +A  RP MS V+  L  L + +PG
Sbjct:  193 KVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLDQLESTKPG 372          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.482e-36
Identity = 85/182 (46.70%), Postives = 117/182 (64.29%), Query Frame = 3
Query:   12 KIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSED-KVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPLLN-ARPG 551
            K+AVGAAKGL +LHE A   +I+RD K++N+L+  D  AK++DF L+   P       ST+V+GT GY APEY  TG+L AKSDVYSFGVVLLEL++GR+ +D++    + SLV WATP L +  K+ + +D +LGG YP             C+  +A  RP MS V+  L+ L + A+PG
Sbjct:  196 KVAVGAAKGLTFLHE-AKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLEQLESVAKPG 376          
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35
Identity = 83/175 (47.43%), Postives = 112/175 (64.00%), Query Frame = 3
Query:   15 IAVGAAKGLEYLHEKADP-HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQYEADFRPNMSIVVKALQPL 533
            +A+ AAKGL +LH  +DP  +I+RDIK+SN+L+  D  AK++DF L+   P       STRV+GT+GY APEY  +G LNA+SDVYSFGV+LLE+L+G++ +DH  P  +++LV WA P L S+ KV   VD RL   Y P            C+ +E   RP M  VV+ALQ L
Sbjct:  180 VALDAAKGLAFLH--SDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQL 352          
The following BLAST results are available for this feature:
BLAST of BQ623394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 359
Match NameE-valueIdentityDescription
Y2706_ARATH3.273e-8988.59Probable receptor-like protein kinase At2g47060 OS... [more]
PTI1_SOLLC9.853e-8686.81Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2197_ARATH2.433e-7675.27Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
PBS1_ARATH2.541e-4149.18Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH3.106e-3947.80Probable serine/threonine-protein kinase RLCKVII O... [more]
Y3545_ARATH4.485e-3849.46Probable receptor-like protein kinase At3g55450 OS... [more]
SRF8_ARATH1.704e-3747.16Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
APK2B_ARATH1.443e-3646.41Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH5.482e-3646.70Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
BIK1_ARATH6.062e-3547.43Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00485 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00485 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623394 ID=BQ623394; Name=BQ623394; organism=Citrus sinensis; type=EST; length=594bp
CCTCGTGCCGGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTG
CATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGTCCAGCAA
TGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTAT
CTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTT
GGAACTTTTGGTTATCATGCTCCTGAGTATGCAATGACTGGACAGTTGAA
TGCAAAGAGTGATGTATACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGA
CAGGTCGAAAACCTGTCGATCATACACTACCACGTGGACAGCAGAGTCTA
GTGACATGGGCCACACCGAAACTTAGTGAAGATAAGGTTAGGCAATGCGT
TGATGCAAGACTAGGAGGAGATTATCCTCCCAAGGCAGTTGCAAAGATGG
CTGCAGTTGCTGCTCTGTGTGTTCAGTATGAAGCTGATTTCCGTCCAAAT
ATGAGCATTGTTGTCAAAGCCCTCCAGCCCCTGCTAAATGCACGGCCTGG
ACCTGCTGGTGAATCAGCAAGCTAGTCAAGCTAGTGACTCTCTC
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