BQ623397

Overview
NameBQ623397
Unique NameBQ623397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 2.910e-43
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 1
Query:   31 AARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            +ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  202 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          

HSP 2 Score: 22.7126 bits (47), Expect = 2.910e-43
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:    3 VFSATDAKRS 32
            VFSATDAKRS
Sbjct:  193 VFSATDAKRS 202          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 2.910e-43
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 1
Query:   31 AARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            +ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  202 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          

HSP 2 Score: 22.7126 bits (47), Expect = 2.910e-43
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:    3 VFSATDAKRS 32
            VFSATDAKRS
Sbjct:  193 VFSATDAKRS 202          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 4.941e-43
Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 1
Query:   31 AARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            +ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHWIFWVGPFIGAALAALYHQ+VIRAIPFKS
Sbjct:  201 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284          

HSP 2 Score: 22.7126 bits (47), Expect = 4.941e-43
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:    3 VFSATDAKRS 32
            VFSATDAKRS
Sbjct:  192 VFSATDAKRS 201          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.375e-42
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHW+FWVGPFIGAALAALYH VVIRAIPFKS
Sbjct:  202 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.375e-42
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH WDDHW+FWVGPFIGAALAALYH VVIRAIPFKS
Sbjct:  202 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKS 284          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 4.408e-42
Identity = 78/83 (93.98%), Postives = 82/83 (98.80%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDH W+DHWIFWVGPF+GAALAA+YHQV+IRAIPFKS
Sbjct:  205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 7.519e-42
Identity = 78/83 (93.98%), Postives = 82/83 (98.80%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+DH W+DHWIFWVGPFIGAALAA+YHQV+IRAIPFKS
Sbjct:  205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 9.820e-42
Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+DH W DHWIFWVGPFIGAALAA+YHQV+IRAIPFKS
Sbjct:  208 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 9.820e-42
Identity = 79/83 (95.18%), Postives = 81/83 (97.59%), Query Frame = 1
Query:   34 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYN+ H WDDHWIFWVGPFIGAALAA+YHQVVIRAIPFKS
Sbjct:  204 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 7.550e-41
Identity = 78/84 (92.86%), Postives = 82/84 (97.62%), Query Frame = 1
Query:   31 AARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 282
            +ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAI++NK  GW+DHWIFWVGPFIGAALAALYHQVVIRAIPFKS
Sbjct:  205 SARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          

HSP 2 Score: 22.7126 bits (47), Expect = 7.550e-41
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 3
Query:    3 VFSATDAKRS 32
            VFSATDAKRS
Sbjct:  196 VFSATDAKRS 205          
The following BLAST results are available for this feature:
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
PIP15_ARATH2.910e-4396.43Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH2.910e-4396.43Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH4.941e-4396.43Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP11_VICFA3.375e-4296.39Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.375e-4296.39Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP11_ORYSJ4.408e-4293.98Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE7.519e-4293.98Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE9.820e-4293.98Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_ORYSJ9.820e-4295.18Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP2_PEA7.550e-4192.86Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00488 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00488 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623397 ID=BQ623397; Name=BQ623397; organism=Citrus sinensis; type=EST; length=492bp
GGGTTTTCTCTGCCACTGACGCCAAACGTAGCCGCCAGAGACTCTCATGT
TCCTATTTTGGCTCCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACT
TGGCTACTATCCCTATTACCGGAACTGGCATCAACCCCGCAAGGAGTCTT
GGAGCTGCAATCATCTACAACAAGGACCACGGTTGGGATGACCATTGGAT
TTTCTGGGTGGGACCATTCATTGGAGCAGCACTTGCAGCTTTGTACCACC
AGGTTGTGATCAGAGCCATTCCGTTCAAATCAAGCTGATGGTCTTATGAA
CGGTCGTGATTGCTGATGCATTTGTTTATGGCTGTCGTTGGTGGTTCTGT
TTTATATTTTAGATTATCCCAAGTCCATGCATTTTCGGTTCGTTAAATTT
TCTGGTTGTTTGGTTTTGTGTATGAATTTTCTGTAATGCCTATGCACAAA
GAAGCCGCTGGCAGTGGCTTTATTTAAATTTATGTAGTTTAT
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