BQ623422

Overview
NameBQ623422
Unique NameBQ623422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4143 contig Csv1_Contig4143:177..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 4.010e-56
Identity = 103/121 (85.12%), Postives = 111/121 (91.74%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSGK 365
            +RSGWGKPETKYTK GPG  GGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFK YAEKYAED  AFFKDYAEAHAKLSNLGAKFDPPEGIV+++   PEKFVAAKYS+GK
Sbjct:  249 DRSGWGKPETKYTKTGPGEAGGQSWTVKWLKFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAEDVAAFFKDYAEAHAKLSNLGAKFDPPEGIVIEN--VPEKFVAAKYSTGK 367          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 1.685e-54
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEK 335
            +RSGWGKPETKYTKDGPG PGGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLS+LGAKFDPPEG  LDD  A E+
Sbjct:  254 DRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGAKFDPPEGFSLDDEPAVEE 364          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 4.588e-52
Identity = 94/104 (90.38%), Postives = 100/104 (96.15%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 314
            ERSGWGKPETKYTK+GPGAPGGQSWT QWLKFDNSYFKDIKERRDEDLLVLPTDAVLFED SFK+YAEKYA DQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  206 ERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 309          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 7.825e-52
Identity = 92/104 (88.46%), Postives = 99/104 (95.19%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 314
            ERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RD+DLLVLPTDA LFEDP+FKVYAEKYAEDQEAFFKDYA AHAKLSNLGAKF+PPEG  LD
Sbjct:  255 ERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLD 358          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 6.625e-51
Identity = 91/104 (87.50%), Postives = 101/104 (97.12%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 314
            ERSGWGKPETKYT++GPGAPGGQSWT +WLKFDNSYFK+IKERRDEDLLVLPTDAVLFED SFK++AEKYAEDQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  217 ERSGWGKPETKYTENGPGAPGGQSWTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 320          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 9.566e-50
Identity = 89/103 (86.41%), Postives = 98/103 (95.15%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVL 311
            ERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RDEDLLVLPTDA +FED SFKVYAEKYA DQ+AFFKDYA AHAKLSNLGA+F+PPEGIV+
Sbjct:  270 ERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGAEFNPPEGIVI 372          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 3
Query:   72 SWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 362
            +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  176 AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.334e-18
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 3
Query:   72 SWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 362
            +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  176 AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.669e-17
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 3
Query:   72 SWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 278
            +WT + LKFDNSYF ++ +   E LL LPTD  L EDPSF+ Y + YA D++ FFKDYAE+H KLS LG
Sbjct:  175 AWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELG 243          
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.394e-16
Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 3
Query:    3 ERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDP 293
            ERSG+         DGP       WT + LKFDNSYF ++ +   E LL LPTD  L EDP F+   E YA+D++AFF+DYAE+H KLS LG  F+P
Sbjct:  168 ERSGF---------DGP-------WTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELG--FNP 246          
The following BLAST results are available for this feature:
BLAST of BQ623422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
APXT_ARATH4.010e-5685.12L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX8_ORYSJ1.685e-5488.29Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX6_ORYSJ4.588e-5290.38Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APX7_ORYSJ7.825e-5288.46Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX5_ORYSJ6.625e-5187.50Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APXS_ARATH9.566e-5086.41L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APX3_ORYSJ4.334e-1846.39Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI4.334e-1846.39Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX4_ORYSJ3.669e-1757.97Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ARATH1.394e-1649.48L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00513 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00513 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623422 ID=BQ623422; Name=BQ623422; organism=Citrus sinensis; type=EST; length=548bp
CTGAACGAAGTGGTTGGGGCAAGCCAGAAACAAAGTACACGAAAGATGGA
CCAGGAGCACCTGGTGGGCAGTCCTGGACAGTACAATGGTTGAAATTTGA
CAACTCCTACTTCAAGGATATTAAAGAAAGAAGGGACGAAGATTTACTCG
TGCTGCCTACTGATGCTGTTCTTTTTGAAGATCCTTCATTCAAGGTTTAT
GCTGAGAAATATGCTGAGGATCAGGAAGCATTCTTTAAGGATTATGCTGA
AGCCCATGCCAAACTCAGCAACCTTGGGGCAAAATTTGACCCTCCTGAGG
GTATCGTGCTAGATGATGGTGCTGCTCCAGAGAAGTTTGTAGCAGCCAAG
TATTCGTCCGGAAAGGACTGAAAAAACAAGTAACTTTGTTTTCTTGTGCC
GTATGTTATAATAATACAAGATGAAGGTTTTTTGAAATCCTGTGTGTGCT
TCACACCTAAAACTTGGAAGTCTAAGTGAAGGTGAAAGAATAAAATTCAA
TTAGTGTTGGCTATTTGAATTGCAGAGTGAGCTGTCAGAGGCTATGAA
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