BQ623444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.175e-31 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK Sbjct: 189 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245 HSP 2 Score: 33.4982 bits (75), Expect = 1.175e-31 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPL LADDPEAFAE Sbjct: 173 SFDPLALADDPEAFAE 188 HSP 3 Score: 25.409 bits (54), Expect = 1.175e-31 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 1 VTDPLYPGGS 30 VTDP+YPGGS Sbjct: 164 VTDPIYPGGS 173
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.264e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 209 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 36.965 bits (84), Expect = 1.264e-31 Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 AFDPLGLADDPEAFAE Sbjct: 193 AFDPLGLADDPEAFAE 208
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.978e-31 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 208 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 HSP 2 Score: 32.7278 bits (73), Expect = 1.978e-31 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADD EAFAE Sbjct: 192 SFDPLGLADDAEAFAE 207 HSP 3 Score: 25.409 bits (54), Expect = 1.978e-31 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 1 VTDPLYPGGSL*SIG 45 V DPLYPGGS +G Sbjct: 183 VVDPLYPGGSFDPLG 197
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.792e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 205 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261 HSP 2 Score: 35.8094 bits (81), Expect = 2.792e-31 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDPEAFAE Sbjct: 189 SFDPLGLADDPEAFAE 204
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.736e-31 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 199 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255 HSP 2 Score: 35.8094 bits (81), Expect = 4.736e-31 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDPEAFAE Sbjct: 183 SFDPLGLADDPEAFAE 198
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.754e-31 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 150 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206 HSP 2 Score: 35.8094 bits (81), Expect = 4.754e-31 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDPEAFAE Sbjct: 134 SFDPLGLADDPEAFAE 149
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 6.163e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 VKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 209 VKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265 HSP 2 Score: 34.2686 bits (77), Expect = 6.163e-31 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 32 FDPLGLADDPEAFAE 76 FDPLGLADDPEAFA+ Sbjct: 194 FDPLGLADDPEAFAD 208
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.163e-31 Identity = 55/57 (96.49%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267 HSP 2 Score: 35.8094 bits (81), Expect = 6.163e-31 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDPEAFAE Sbjct: 195 SFDPLGLADDPEAFAE 210
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 8.026e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 34.2686 bits (77), Expect = 8.026e-31 Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLA+DPEAFAE Sbjct: 195 SFDPLGLAEDPEAFAE 210
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 8.026e-31 Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 248 +KVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 211 LKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267 HSP 2 Score: 34.2686 bits (77), Expect = 8.026e-31 Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLA+DPEAFAE Sbjct: 195 SFDPLGLAEDPEAFAE 210 The following BLAST results are available for this feature:
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623444 ID=BQ623444; Name=BQ623444; organism=Citrus sinensis; type=EST; length=343bpback to top |