BQ623446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_LUPPO (40S ribosomal protein S16 OS=Lupinus polyphyllus GN=RPS16 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.377e-37 Identity = 69/74 (93.24%), Postives = 70/74 (94.59%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 + G SQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 72 KGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145 HSP 2 Score: 37.3502 bits (85), Expect = 1.377e-37 Identity = 16/16 (100.00%), Postives = 16/16 (100.00%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 FAGVDMRIRVKGGGHT Sbjct: 62 FAGVDMRIRVKGGGHT 77
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.526e-36 Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 + G SQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILV YDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 72 KGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145 HSP 2 Score: 35.8094 bits (81), Expect = 2.526e-36 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 F GVDMRIRVKGGGHT Sbjct: 62 FTGVDMRIRVKGGGHT 77
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.095e-35 Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 + G SQIYAIRQSIAKALVA++QKYVDEQSKKEIKD+L+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR Sbjct: 69 KGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 142 HSP 2 Score: 34.6538 bits (78), Expect = 2.095e-35 Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 FAGVDMRIRVKGGG+T Sbjct: 59 FAGVDMRIRVKGGGNT 74
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.629e-35 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 2 Query: 38 GDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 G SQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR Sbjct: 75 GGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146 HSP 2 Score: 33.4982 bits (75), Expect = 4.629e-35 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 FAGV+MRIRV GGGHT Sbjct: 63 FAGVNMRIRVNGGGHT 78
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.629e-35 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 2 Query: 38 GDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 G SQ+YAIRQSIAKALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR Sbjct: 75 GGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146 HSP 2 Score: 33.4982 bits (75), Expect = 4.629e-35 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 FAGV+MRIRV GGGHT Sbjct: 63 FAGVNMRIRVNGGGHT 78
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.023e-34 Identity = 65/74 (87.84%), Postives = 70/74 (94.59%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 R G SQIYAIRQSIAKALVA+YQKYVDEQ+KKE+KDIL+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR Sbjct: 72 RGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 145 HSP 2 Score: 31.187 bits (69), Expect = 1.023e-34 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 F GVDMRIRV+GGG T Sbjct: 62 FVGVDMRIRVRGGGKT 77
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 9.137e-33 Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 R G SQIYAIRQ+IAKALVA+YQKYVDE SKKE+KDI RYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149 HSP 2 Score: 27.7202 bits (60), Expect = 9.137e-33 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 F +DMRIRV+GGG T Sbjct: 66 FKDIDMRIRVRGGGKT 81
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 9.137e-33 Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 R G SQIYAIRQ+IAKALVA+YQKYVDE SKKE+KDI RYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 76 RGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149 HSP 2 Score: 27.7202 bits (60), Expect = 9.137e-33 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 F +DMRIRV+GGG T Sbjct: 66 FKDIDMRIRVRGGGKT 81
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS162_ARATH (40S ribosomal protein S16-2 OS=Arabidopsis thaliana GN=RPS16B PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.191e-32 Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 2 Query: 38 GDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 G S++YAIRQSIAKALVA+YQKYVDEQSKKEIKDIL+RYDRTLLVADPRRCE KKFGG GARARFQKSYR Sbjct: 75 GGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRCESKKFGGPGARARFQKSYR 146 HSP 2 Score: 30.8018 bits (68), Expect = 1.191e-32 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGHT 48 FAGVDMRIR GGG+T Sbjct: 63 FAGVDMRIRATGGGNT 78
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Match: RS16_RAT (40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.630e-32 Identity = 60/74 (81.08%), Postives = 68/74 (91.89%), Query Frame = 2 Query: 32 RAGDTLSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 253 + G ++QIYAIRQSI+KALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 73 KGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146 HSP 2 Score: 33.4982 bits (75), Expect = 2.630e-32 Identity = 13/15 (86.67%), Postives = 15/15 (100.00%), Query Frame = 1 Query: 1 FAGVDMRIRVKGGGH 45 FAGVD+R+RVKGGGH Sbjct: 63 FAGVDIRVRVKGGGH 77 The following BLAST results are available for this feature:
BLAST of BQ623446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623446 ID=BQ623446; Name=BQ623446; organism=Citrus sinensis; type=EST; length=445bpback to top |