BQ623466

Overview
NameBQ623466
Unique NameBQ623466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig613 contig Csv1_Contig613:63..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 7.918e-80
Identity = 138/178 (77.53%), Postives = 152/178 (85.39%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 534
            GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHL+GAYQV+CQPLFAFIEKQA  +FPDSEFI KDIK+PIPGFK   LN+FRL+WRT+FVI+TTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIP+WST+W+CLQ+ S+ CL                DLKSYKPF + Y
Sbjct:  299 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSEFIAKDIKIPIPGFKPLRLNVFRLIWRTVFVIITTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPRWSTRWVCLQVFSLGCLVVSIAAAAGSIAGVLLDLKSYKPFRSEY 476          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.288e-69
Identity = 121/178 (67.98%), Postives = 142/178 (79.78%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 534
            GD +PGNLL   GF NPYWLLDIAN AIVIHLVGAYQV+CQPLFAF+EK+A +RFP+SEF+TK+IK+ +   K +NLNLFRLVWRT FV+ TT+ISML+PFFNDVVGLLGA+GFWPLTVYFPVEMYIAQK +P+W TKW+CLQ+LSV CL                DLK YKPF + +
Sbjct:  303 GDNAPGNLLAHGGFRNPYWLLDIANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESEFVTKEIKIQLFPGKPFNLNLFRLVWRTFFVMTTTLISMLMPFFNDVVGLLGAIGFWPLTVYFPVEMYIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGIVSDLKVYKPFQSEF 480          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.213e-69
Identity = 119/179 (66.48%), Postives = 147/179 (82.12%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKC-YNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 534
            GD +PGNLLTGFGFYNP+WLLDIANAAIV+HLVGAYQVF QP+FAFIEK   +R+PD++F++K+ ++ IPGFK  Y +N+FR+V+R+ FV+ TTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ KWST+W+CLQ+LSVACL                DLK YKPF ++Y
Sbjct:  315 GDAAPGNLLTGFGFYNPFWLLDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEFEIRIPGFKSPYKVNVFRMVYRSGFVVTTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIKQRKVEKWSTRWVCLQMLSVACLVISVVAGVGSIAGVMLDLKVYKPFKSTY 493          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.830e-68
Identity = 121/179 (67.60%), Postives = 144/179 (80.45%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKC-YNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 534
            GD +PGNLLTGFGFYNP+WLLD+ANAAIVIHLVGAYQVF QP+FAFIEKQA  RFPDS+ +TK+ ++ IPGF+  Y +N+FR V+R+ FV+LTTVISML+PFFNDVVG+LGALGFWPLTVYFPVEMYI Q+K+ +WS KW+CLQ+LS  CL                DLK YKPF T+Y
Sbjct:  288 GDKAPGNLLTGFGFYNPFWLLDVANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSDLVTKEYEIRIPGFRSPYKVNVFRAVYRSGFVVLTTVISMLMPFFNDVVGILGALGFWPLTVYFPVEMYIRQRKVERWSMKWVCLQMLSCGCLMITLVAGVGSIAGVMLDLKVYKPFKTTY 466          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.747e-54
Identity = 92/174 (52.87%), Postives = 124/174 (71.26%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 522
            G+ +PGN LTGFGFY P+WL+D AN  I +HL+GAYQVFCQP+F F+E Q+ +R+PD++FIT + K+ +P    +++N  RLVWRT +V++T V++M+ PFFND +GL+GA  FWPLTVYFP+EM+IAQKKIPK+S  W  L+ILS  C                  LK +KPF
Sbjct:  305 GNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQSAKRWPDNKFITGEYKIHVPCCGDFSINFLRLVWRTSYVVVTAVVAMIFPFFNDFLGLIGAASFWPLTVYFPIEMHIAQKKIPKFSFTWTWLKILSWTCFIVSLVAAAGSVQGLIQSLKDFKPF 478          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.251e-53
Identity = 88/178 (49.44%), Postives = 127/178 (71.35%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPFSTSY 534
            G+ +PG+ LT FGF+ P+WL+D ANA I +HL+GAYQVF QP+F F+EK+ ++ +PD++FIT +  V +P    +N++LFRLVWRT +V++TTV++M+ PFFN ++GL+GA  FWPLTVYFPVEM+IAQ KI K+S +W+ L+ +   CL                 +K+YKPF T +
Sbjct:  307 GNNAPGDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEKKCNRNYPDNKFITSEYSVNVPFLGKFNISLFRLVWRTAYVVITTVVAMIFPFFNAILGLIGAASFWPLTVYFPVEMHIAQTKIKKYSARWIALKTMCYVCLIVSLLAAAGSIAGLISSVKTYKPFRTMH 484          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.720e-50
Identity = 93/176 (52.84%), Postives = 123/176 (69.89%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDI--KVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACLXXXXXXXXXXXXXXXXDLKSYKPF 522
            G+ +PG+ LT FGFY PYWL+D ANA I +HL+GAYQV+ QP F F+E+  ++++P S FI K+   KVP+ G KC  +NLFRLVWRT +V+LTT ++M+ PFFN ++GLLGA  FWPLTVYFPV M+IAQ K+ K+S +WL L +L + CL                 +KSYKPF
Sbjct:  298 GNQAPGDFLTDFGFYEPYWLIDFANACIALHLIGAYQVYAQPFFQFVEENCNKKWPQSNFINKEYSSKVPLLG-KC-RVNLFRLVWRTCYVVLTTFVAMIFPFFNAILGLLGAFAFWPLTVYFPVAMHIAQAKVKKYSRRWLALNLLVLVCLIVSALAAVGSIIGLINSVKSYKPF 471          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 78/152 (51.32%), Postives = 111/152 (73.03%), Query Frame = 1
Query:    1 GDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITK--DIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPKWSTKWLCLQILSVACL 450
            GD +PGNLLTGFGFY P+WL+D ANA IV+HLVG YQV+ QP+FA  E+   +++P+++FI +    K+P+   +   LN  R+  RT++V++TT ++++ P+FN+V+G++GAL FWPL VYFPVEM I QKKI  W+  WL L+  S  CL
Sbjct:  296 GDSTPGNLLTGFGFYEPFWLVDFANACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFIARFYGFKLPLLRGETVRLNPMRMCLRTMYVLITTGVAVMFPYFNEVLGVVGALAFWPLAVYFPVEMCILQKKIRSWTRPWLLLRGFSFVCL 447          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.347e-15
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 1
Query:   49 PYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPK----WSTKWLCLQI 432
            P WL+ IANA +V+H++G+YQ++  P+F  +E           F+ K +    P FK       R + RT++V  T  +++ +PFF  ++G  G   F P T Y P  M++  KK  K    W   W C+ +
Sbjct:  300 PIWLIAIANAFVVVHVIGSYQIYAMPVFDMLET----------FLVKKMMFA-PSFK------LRFITRTLYVAFTMFVAICIPFFGGLLGFFGGFAFAPTTYYLPCIMWLCIKKPKKYGLSWCINWFCIVV 414          
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Match: LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana GN=LHT2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 1
Query:   49 PYWLLDIANAAIVIHLVGAYQVFCQPLFAFIEKQAHQRFPDSEFITKDIKVPIPGFKCYNLNLFRLVWRTIFVILTTVISMLLPFFNDVVGLLGALGFWPLTVYFPVEMYIAQKKIPK-----WSTKWLCL 426
            P WL+ +AN  +VIH++G+YQ+F  P+F  +E    ++   +           P FK       R + R+++V  T ++++ +PFF  ++G  G   F P T Y P  M++  KK PK     W+  W C+
Sbjct:  300 PIWLIAMANMFVVIHVIGSYQIFAMPVFDMLETVLVKKMNFN-----------PSFK------LRFITRSLYVAFTMIVAICVPFFGGLLGFFGGFAFAPTTYYLPCIMWLVLKK-PKRFGLSWTANWFCI 412          
The following BLAST results are available for this feature:
BLAST of BQ623466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
AAP3_ARATH7.918e-8077.53Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP5_ARATH6.288e-6967.98Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH8.213e-6966.48Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH1.830e-6867.60Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP6_ARATH9.747e-5452.87Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH8.251e-5349.44Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH1.720e-5052.84Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH7.741e-4351.32Probable amino acid permease 7 OS=Arabidopsis thal... [more]
LHTL2_ARATH2.347e-1531.82Lysine histidine transporter-like 2 OS=Arabidopsis... [more]
LHT2_ARATH3.389e-1430.53Lysine histidine transporter 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00557 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00557 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623466 ID=BQ623466; Name=BQ623466; organism=Citrus sinensis; type=EST; length=674bp
GGAGACTTGTCGCCCGGAAATTTGCTCACTGGTTTTGGCTTTTATAACCC
ATATTGGCTACTTGACATAGCCAATGCAGCCATTGTCATCCACCTTGTTG
GTGCATACCAAGTTTTCTGCCAACCCCTCTTTGCATTCATTGAAAAACAA
GCTCATCAAAGATTCCCGGATAGCGAATTCATCACAAAGGATATTAAAGT
CCCAATCCCAGGATTTAAGTGCTACAACCTCAACCTCTTCCGGTTGGTTT
GGAGGACAATTTTTGTCATCTTAACAACTGTGATTTCAATGCTTCTCCCA
TTCTTTAACGACGTTGTTGGTCTCCTCGGAGCTCTAGGATTTTGGCCACT
TACAGTTTACTTCCCTGTTGAGATGTATATTGCGCAAAAGAAGATACCAA
AGTGGAGCACAAAATGGCTTTGTCTCCAAATCCTAAGCGTAGCTTGCCTA
ATAATCACCATAGCTGCAGCGGCTGGCTCTATTGCAGGAGTTGTTACTGA
CCTTAAGTCTTATAAGCCCTTCAGCACCAGCTACTAATTCAGTCTGATTA
CAAATGGAAGTAGCCATTGATGATGTTCGACAAGGAAAAGGATCAATCAT
TAGACTTTTCAGTTCTTGGTCATGTTAATATGTCAAGTGCATAAACCGGC
CATGTACTGCTATTTTCATTAGCT
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