BQ623502

Overview
NameBQ623502
Unique NameBQ623502
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7050 contig Csv1_Contig7050:355..973. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: CRD1_EUPES (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula GN=CRD1 PE=3 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 8.459e-99
Identity = 169/175 (96.57%), Postives = 172/175 (98.29%), Query Frame = 2
Query:   56 RKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSGYV 580
            ++ ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS YV
Sbjct:  114 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYV 288          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: CRD1_ARATH (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana GN=CRD1 PE=2 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 4.642e-97
Identity = 166/175 (94.86%), Postives = 171/175 (97.71%), Query Frame = 2
Query:   56 RKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSGYV 580
            ++ ADK+QGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDW+AKLW+RFFCLS YV
Sbjct:  118 KEAADKLQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWQAKLWSRFFCLSVYV 292          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: CRD1_HORVU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 5.132e-96
Identity = 164/175 (93.71%), Postives = 171/175 (97.71%), Query Frame = 2
Query:   56 RKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSGYV 580
            ++ ADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITI+RHLKANPE+Q YPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLS Y+
Sbjct:  126 KEAADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIFRHLKANPEYQVYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYI 300          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: CRD1_GOSHI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2)

HSP 1 Score: 348.206 bits (892), Expect = 1.950e-95
Identity = 163/175 (93.14%), Postives = 169/175 (96.57%), Query Frame = 2
Query:   56 RKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSGYV 580
            ++ ADK+ GPLRQIFVEF ERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFN ALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLS YV
Sbjct:  114 KEAADKIDGPLRQIFVEFSERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYV 288          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: CTH1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii GN=CTH1 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.121e-85
Identity = 142/175 (81.14%), Postives = 163/175 (93.14%), Query Frame = 2
Query:   56 RKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSGYV 580
            ++ A+K+QGP R+IF+EFLERSCTAEFSGFLLYKELGRRLK TNPVVAEIF+LMSRDEARHAGFLNK +SDFN ALDLGFLTK RKYTFFKPKFIFYATYLSEKIGYWRYI+IYRHL+ NP+ Q YP+F+YFENWCQDENRHGDFF+A++KA+P+ +NDW AKLW+RFFCLS Y+
Sbjct:  116 KEAAEKIQGPTRKIFIEFLERSCTAEFSGFLLYKELGRRLKATNPVVAEIFTLMSRDEARHAGFLNKAMSDFNLALDLGFLTKNRKYTFFKPKFIFYATYLSEKIGYWRYISIYRHLQRNPDNQLYPLFEYFENWCQDENRHGDFFTAVLKARPEMVNDWAAKLWSRFFCLSVYI 290          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: ACSF_TRIEI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Trichodesmium erythraeum (strain IMS101) GN=acsF PE=3 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.345e-84
Identity = 134/168 (79.76%), Postives = 154/168 (91.67%), Query Frame = 2
Query:   68 DKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS 571
            D + G  R++FVEFLERSCTAEFSGFLLYKELGRRLK  +P++AE F+LMSRDEARHAGFLNK +SDFN +LDLGFLTK+RKYTFFKPKFIFYATYLSEKIGYWRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+M+A+P+FLNDW+AKLW RFF LS
Sbjct:   77 DHIDGETRRLFVEFLERSCTAEFSGFLLYKELGRRLKNKSPILAECFTLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMRARPEFLNDWQAKLWCRFFLLS 244          

HSP 2 Score: 33.8834 bits (76), Expect = 1.345e-84
Identity = 12/21 (57.14%), Postives = 18/21 (85.71%), Query Frame = 1
Query:    1 QEFKTDYNQTHFVRNKEFKEA 63
            +EF+ DYN+ HFVRN+EF ++
Sbjct:   55 EEFRADYNRHHFVRNEEFAQS 75          

HSP 3 Score: 25.409 bits (54), Expect = 1.345e-84
Identity = 12/20 (60.00%), Postives = 12/20 (60.00%), Query Frame = 1
Query:  559 FLPLGVCTMYLNDCQRTAFY 618
            FL     TMYLND QR  FY
Sbjct:  241 FLLSVFATMYLNDIQRADFY 260          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: ACSF1_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Synechocystis sp. (strain PCC 6803) GN=acsF1 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.117e-83
Identity = 138/174 (79.31%), Postives = 151/174 (86.78%), Query Frame = 2
Query:   50 SSRKPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS 571
            S  K  D + G  RQ+FVEFLERSCTAEFSGFLLYKELGRRLK  NP++AE F+LMSRDEARHAGFLNK +SDFN +LDLGFLTK+RKYTFFKPKFIFYATYLSEKIGYWRYITIYRHL+ NP    YPIF++FENWCQDENRHGDFF A+M+AQP  LNDWKAKLW RFF LS
Sbjct:   71 SFNKSWDHIDGEKRQLFVEFLERSCTAEFSGFLLYKELGRRLKNKNPLLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEKNPNDCIYPIFEFFENWCQDENRHGDFFDAIMRAQPHTLNDWKAKLWCRFFLLS 244          

HSP 2 Score: 31.9574 bits (71), Expect = 1.117e-83
Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 QEFKTDYNQTHFVRNKEFKEA 63
            +EF+ DYN+ HFVRN+ F ++
Sbjct:   55 EEFRVDYNRHHFVRNESFNKS 75          

HSP 3 Score: 25.409 bits (54), Expect = 1.117e-83
Identity = 12/20 (60.00%), Postives = 12/20 (60.00%), Query Frame = 1
Query:  559 FLPLGVCTMYLNDCQRTAFY 618
            FL     TMYLND QR  FY
Sbjct:  241 FLLSVFATMYLNDTQRADFY 260          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: ACSF3_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3 OS=Anabaena sp. (strain PCC 7120) GN=acsF3 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 1.602e-83
Identity = 137/171 (80.12%), Postives = 154/171 (90.06%), Query Frame = 2
Query:   59 KPADKMQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS 571
            K  D + G  R++FVEFLERSCTAEFSGFLLYKELGRRLK  +PV+AE F+LMSRDEARHAGFLNK +SDFN +LDLGFLTK+R YTFFKPKFIFYATYLSEKIGYWRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+MK+QPQ LNDWKAKLW+RFF LS
Sbjct:   74 KSWDHIDGDTRRLFVEFLERSCTAEFSGFLLYKELGRRLKDKSPVLAECFNLMSRDEARHAGFLNKAMSDFNLSLDLGFLTKSRNYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMKSQPQMLNDWKAKLWSRFFLLS 244          

HSP 2 Score: 33.4982 bits (75), Expect = 1.602e-83
Identity = 12/21 (57.14%), Postives = 19/21 (90.48%), Query Frame = 1
Query:    1 QEFKTDYNQTHFVRNKEFKEA 63
            +EF+TDYN+ HFVR+ EF+++
Sbjct:   55 EEFRTDYNRHHFVRDAEFEKS 75          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.344e-79
Identity = 128/161 (79.50%), Postives = 145/161 (90.06%), Query Frame = 2
Query:   89 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS 571
            + +F+EFLERSCTAEFSGFLLYKEL R+LK  NPV+AE F LMSRDEARHAGFLNK + DFN +LDLGFLTK+RKYTFF PKFIFYATYLSEKIGYWRYITIYRHL+ +PE + YPIF++FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LS
Sbjct:   75 KSLFIEFLERSCTAEFSGFLLYKELSRKLKDRNPVIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKSRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHLEQHPEHRIYPIFRFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLS 235          

HSP 2 Score: 31.9574 bits (71), Expect = 1.344e-79
Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = 1
Query:    1 QEFKTDYNQTHFVRNKEFKEA 63
            +EF+ DYN  HF+R++EF ++
Sbjct:   46 EEFRADYNSEHFIRDEEFNQS 66          
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.982e-79
Identity = 127/161 (78.88%), Postives = 144/161 (89.44%), Query Frame = 2
Query:   89 RQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNYALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLS 571
            + +F+EFLERSCTAEFSGFLLYKEL R+LK +NP++AE F LMSRDEARHAGFLNK + DFN +LDLGFLTK RKYTFF PKFIFYATYLSEKIGYWRYITIYRH++  PE + YPIFK+FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LS
Sbjct:   75 KSLFIEFLERSCTAEFSGFLLYKELSRKLKDSNPIIAECFLLMSRDEARHAGFLNKAIGDFNLSLDLGFLTKTRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHMEQYPEHRIYPIFKFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLS 235          

HSP 2 Score: 31.5722 bits (70), Expect = 2.982e-79
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 1
Query:    1 QEFKTDYNQTHFVRNKEFKEA 63
            +EF+ DYN  HF+R +EF ++
Sbjct:   46 EEFRADYNSQHFIRGEEFNQS 66          
The following BLAST results are available for this feature:
BLAST of BQ623502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CRD1_EUPES8.459e-9996.57Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_ARATH4.642e-9794.86Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_HORVU5.132e-9693.71Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_GOSHI1.950e-9593.14Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CTH1_CHLRE3.121e-8581.14Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_TRIEI1.345e-8479.76Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF1_SYNY31.117e-8379.31Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF3_ANASP1.602e-8380.12Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE1.344e-7979.50Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU2.982e-7978.88Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00593 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00593 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623502 ID=BQ623502; Name=BQ623502; organism=Citrus sinensis; type=EST; length=619bp
CAAGAATTCAAGACTGATTATAACCAGACTCACTTTGTGAGGAACAAGGA
GTTCAAGGAAGCCTGCTGACAAGATGCAAGGCCCTCTCAGGCAGATCTTT
GTTGAGTTCTTGGAGAGGTCTTGCACTGCTGAGTTCTCTGGTTTCCTTCT
TTACAAAGAGCTCGGAAGGAGACTCAAGAAAACCAACCCAGTGGTAGCTG
AGATTTTCTCTCTGATGTCCAGGGATGAAGCCAGGCATGCCGGGTTTCTG
AACAAGGGGCTATCTGATTTCAATTATGCATTGGACTTGGGCTTCCTGAC
AAAAGCTAGGAAATACACATTTTTCAAGCCAAAGTTTATCTTTTATGCCA
CATATTTATCTGAGAAGATTGGATACTGGAGATACATTACCATATACAGA
CATCTCAAGGCCAACCCTGAGTTCCAATGTTATCCCATTTTCAAGTATTT
TGAGAACTGGTGCCAGGATGAGAACCGTCACGGTGATTTCTTCTCAGCCT
TGATGAAGGCACAACCCCAGTTCCTCAATGACTGGAAGGCAAAGTTGTGG
GCCCGATTTTTCTGCCTCTCGGGGTATGTACAATGTATCTCAATGACTGC
CAGCGTACTGCTTTCTATG
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