BQ623504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623504 vs. ExPASy Swiss-Prot
Match: PSAK_ARATH (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana GN=PSAK PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 3.566e-36 Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 3 Query: 6 QPSQ*GGNAVEPLGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVG 275 QP + GN LGA+C FIGS TNLIMVT+TTLMLFAGRFGLAPSANRKATAGL+LE RDSGLQTGDPAGFTLADTLACG+VGHIIGVG Sbjct: 32 QPMRRKGNGA--LGAKCDFIGSSTNLIMVTSTTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVG 119 HSP 2 Score: 25.0238 bits (53), Expect = 3.566e-36 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 275 GVVLGLKNLGAL 310 GVVLGLKN+GA+ Sbjct: 119 GVVLGLKNIGAI 130
BLAST of BQ623504 vs. ExPASy Swiss-Prot
Match: PSAK_MEDSA (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa GN=PSAK PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.815e-34 Identity = 74/86 (86.05%), Postives = 77/86 (89.53%), Query Frame = 3 Query: 42 LGARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGGWSLALRT 299 LG RC FIGS TN+IMV +TTLMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACG+VGHIIGV G L LRT Sbjct: 42 LGVRCDFIGSSTNVIMVASTTLMLFAGRFGLAPSANRKATAGLKLETRDSGLQTGDPAGFTLADTLACGTVGHIIGV-GVVLGLRT 126
BLAST of BQ623504 vs. ExPASy Swiss-Prot
Match: PSAK_HORVU (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare GN=PSAK PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 7.056e-34 Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 3 Query: 45 GARCGFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVG 275 G RC +IGS TNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLE R+SGLQTGDPAGFTLADTLACG+VGHI+GVG Sbjct: 39 GIRCDYIGSSTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKLEARESGLQTGDPAGFTLADTLACGAVGHIMGVG 115 HSP 2 Score: 22.7126 bits (47), Expect = 7.056e-34 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2 Query: 275 GVVLGLKNLGAL 310 G+VLGLKN G L Sbjct: 115 GIVLGLKNTGVL 126
BLAST of BQ623504 vs. ExPASy Swiss-Prot
Match: PSAK_CHLRE (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAK PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.075e-16 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 57 GFIGSPTNLIMVTTTTLMLFAGRFGLAPSANRKATAGLKL--EVRDSGLQTGDPAGFTLADTLACGSVGHIIGVG 275 GFIGS TNLIMV +TT L A RFGLAP+ + TAGLKL +G+ + DPAGFT+ D LA G+ GH +GVG Sbjct: 28 GFIGSSTNLIMVASTTATLAAARFGLAPTVKKNTTAGLKLVDSKNSAGVISNDPAGFTIVDVLAMGAAGHGLGVG 102 HSP 2 Score: 23.0978 bits (48), Expect = 1.075e-16 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 275 GVVLGLKNLGAL 310 G+VLGLK +GAL Sbjct: 102 GIVLGLKGIGAL 113 The following BLAST results are available for this feature:
BLAST of BQ623504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623504 ID=BQ623504; Name=BQ623504; organism=Citrus sinensis; type=EST; length=339bpback to top |