BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.871e-29
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 3
Query:   33 GGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGD 341
            GG+NPPH+HPR TEAG+V  G++ VG +TTNNT FSKVL  G++F++PR LVHFQ NVG   A  I  FN+Q PG +    T+F + P +PN VLTK+FR  D
Sbjct:  106 GGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDD 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 2.673e-27
Identity = 57/108 (52.78%), Postives = 72/108 (66.67%), Query Frame = 3
Query:   18 LDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGD 341
            ++L  GG+NPPH HPR TE G V  G++ VG ++TNNT FSKVL  G+ F+IPR LVHFQ NVG   A  I  FN+Q PG      T+F + P +PN VLT++FR  D
Sbjct:  101 VELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDD 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 58/110 (52.73%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV RG LLVGI+    T N ++SKV+  G+ F+IPR L+HFQ NVG   AT +  FN+QNPG+     T+F + PP+P  VL K+ RV
Sbjct:  104 RVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRV 213          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 58/110 (52.73%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV RG LLVGI+    T N ++SKV+  G+ F+IPR L+HFQ NVG   AT +  FN+QNPG+     T+F + PP+P  VL K+ RV
Sbjct:  102 RVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT---NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            R+D   GG NPPH HPR TE GIV RG LLVGI+ T    N ++SKV+  G+ F+IPR L+HFQ NVG   AT +  FN+QNPG+     T+F + PP+P  VL K+ RV   V
Sbjct:  104 RVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGV 217          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.016e-26
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVG 338
            R+D   GG+NPPHTHPR TE   V  G L VG +TT N   +K +  G+ F+ P+ LVHFQ N G EPAT I  FN+Q PG  +   T+F+ATPPVP+ VLTK+F++G
Sbjct:   95 RIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQIG 202          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.732e-26
Identity = 57/110 (51.82%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV RG LLVGI+    T N ++S+V+  G+ F+IPR L+HFQ NVG   AT +  FN+QNPG+     T+F + PP+P  VL K+ RV
Sbjct:  102 RIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.263e-26
Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVG 338
            L R+D   GG+NPPHTHPR TE   V  G L VG +TT N  F+K +  G+VF+ PR LVHFQ N G  PA+ +  FN+Q PG +    T+F A P +P +VLTK+F+VG
Sbjct:   95 LARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVG 204          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVG 338
            R+D   GG+NPPHTHPR TE   V +GTL VG +TT N  ++K ++ G VF+ PR L+HFQ N G+ PA  I  FN+Q PG      T+F A+P VP+ VLTK+F+VG
Sbjct:   98 RIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVG 205          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26
Identity = 57/107 (53.27%), Postives = 69/107 (64.49%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPHTHPR TE   V  G L VG +TT N  F+K +T G+VF+ PR LVHFQ N G+ PA  I  FN+Q  G      T+F A PPVP++VL K+FRV
Sbjct:   97 RIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITTANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRV 203          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GLT2_ARATH4.871e-2956.31Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLT1_ARATH2.673e-2752.78Germin-like protein subfamily T member 1 OS=Arabid... [more]
GL36_ORYSJ7.776e-2752.73Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ7.776e-2752.73Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ7.776e-2751.75Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
RHRE_PEA1.016e-2652.78Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL33_ORYSJ1.732e-2651.82Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH2.263e-2650.91Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL52_ORYSJ2.955e-2651.85Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL11_ORYSJ8.598e-2653.27Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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