BQ623509

Overview
NameBQ623509
Unique NameBQ623509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3368 contig Csv1_Contig3368:74..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT6_ARATH (Glycerol-3-phosphate acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 3.000e-99
Identity = 173/209 (82.78%), Postives = 193/209 (92.34%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIQVANYIQ 629
            W+P+G +LSI+RVYTNIPLPER+A YNYKL GIK++V G PPP PK GQ G L +CNHRTVLDPVVTAVALGRKISCVTYSISKF+E+ISPIKAVAL+R+REKDAA+IK+LLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQS+F+GTT RG+KLLDPY+ FMNPRPTYEITFL Q+P ELT KGGKS I+VANYIQ
Sbjct:  256 WLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKPGQPGHLLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKLLDPYFAFMNPRPTYEITFLKQIPAELTCKGGKSPIEVANYIQ 464          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT4_ARATH (Glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.215e-77
Identity = 133/210 (63.33%), Postives = 172/210 (81.90%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVK-GGKSAIQVANYIQ 629
            W+P G +LS+ RVY N+PLPER   Y Y++LGI + ++G  PP P  G+ G L++ NHRT LDP++ A+ALGRKI+CVTYS+S+ + ++SPI AVAL+R+R  DAA ++QLLE+GDLVICPEGTTCREP+LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG K  DPY+ FMNPRP+YE TFL++LP E+TV  GGK+  +VANY+Q
Sbjct:  254 WLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPFEVANYVQ 463          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT8_ARATH (Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 1.227e-76
Identity = 134/210 (63.81%), Postives = 172/210 (81.90%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVK-GGKSAIQVANYIQ 629
            W+P G ILSI+RVY N+PLPER   Y Y++LGI + ++G  PP P  G  G L++ NHRT LDP++ A+ALGRKI CVTYS+S+ + ++SPI AVAL+R+R  DAA++++LLE+GDLVICPEGTTCRE +LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG K  DPY+ FMNPRP+YE TFL++LP E+TV  GGK+ I+VANY+Q
Sbjct:  253 WLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKFWDPYFFFMNPRPSYEATFLDRLPEEMTVNGGGKTPIEVANYVQ 462          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT5_ARATH (Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.897e-69
Identity = 129/209 (61.72%), Postives = 154/209 (73.68%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIQVANYIQ 629
            W+P GIIL+++R++    LP     Y  ++ G  +IVKG PP  P  G+SGVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI  V L+R R+ DAA IKQ L +GDLV+CPEGTTCREPFLLRFSALFAELTDRIVPVA+N +   FH TT RG K LDP + FMNPRP YEITFLNQLP E T   GKS   VANY+Q
Sbjct:  243 WIPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEITFLNQLPMEATCSSGKSPHDVANYVQ 451          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT7_ARATH (Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 7.718e-63
Identity = 119/209 (56.94%), Postives = 144/209 (68.90%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIQVANYIQ 629
            W+P GIIL+++R++    LP     Y  ++   + IVKG PP     G  GVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI    L+R R+ DA  IK+ L  GDLV+ PEGTTCREPFLLRFSALFAELTD IVPVA+N +   FH TT RG K LDP + FMNPRP YE+TFLNQL  E T   GKS   VANY+Q
Sbjct:  241 WIPFGIILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPPAQATTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWKGLDPIFFFMNPRPVYEVTFLNQLEVEATCSSGKSPYDVANYVQ 449          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT1_ARATH (Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.682e-60
Identity = 107/211 (50.71%), Postives = 153/211 (72.51%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVK--GTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLPPELTVKGGKSAIQVANYIQ 629
            W+PIG +L++ R+   + LP  +A +   + G+++  K        P+ G SGVL++CNHRT+LDPV    +LG+ ++ VTYS+SKF+E I+P+K V+L R+R+KD   +++LL +GDLV+CPEGTTCREP+LLRFS LFAELT+ IVPVA++ + S+F+GTT  G K LDP +  MNPRP Y +  L +LP E+T  GGKS+ +VAN+IQ
Sbjct:  344 WLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGRPEKGNSGVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKCLDPIFFLMNPRPVYCLEILKKLPKEMTCAGGKSSFEVANFIQ 554          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT3_ARATH (Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.750e-42
Identity = 93/214 (43.46%), Postives = 131/214 (61.21%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQS---GVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQLP-PELTVKGGKSAIQVANYIQ 629
            W P     +  R++ ++ +P  L+       G ++ V      + K   S   G LF+CNHRT+LDP+  A AL +K I  VTYS+S+ +EI++PIK V L+R+R  D   +++LL EGDLV+CPEGTTCREP+LLRFS LF E++D IVPVA+    + F+GTT  G K LDP +  ++P PTY I FL+ +         GK   +VAN +Q
Sbjct:  274 WGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVCNHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEGDLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLKALDPLFFLLDPYPTYTIQFLDPVSGATCQDPDGKLKFEVANNVQ 487          
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Match: GPAT2_ARATH (Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41
Identity = 90/218 (41.28%), Postives = 137/218 (62.84%), Query Frame = 3
Query:    3 WMPIGIILSILRVYTNIPLPERLA--WYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKLLDPYYVFMNPRPTYEITFLNQL--PPELTVKG----GKSAIQVANYIQ 629
            W P   +L+  R+   + LP  LA  +  +  + + + V         + + G LF+CNHRT+LDP+  + AL +K +  VTYS+S+ +E+++PIK V L+R+R KD   +++LL +GDLV+CPEGTTCREP+LLRFS LF+E+ D IVPVAI++  + F+GTT  G K  DP +  +NP P+Y +  L+ +      T +G    GK   +VAN++Q
Sbjct:  280 WAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNNHNDLISADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLKAFDPIFFLLNPFPSYTVKLLDPVSGSSSSTCRGVPDNGKVNFEVANHVQ 497          
The following BLAST results are available for this feature:
BLAST of BQ623509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GPAT6_ARATH3.000e-9982.78Glycerol-3-phosphate acyltransferase 6 OS=Arabidop... [more]
GPAT4_ARATH4.215e-7763.33Glycerol-3-phosphate acyltransferase 4 OS=Arabidop... [more]
GPAT8_ARATH1.227e-7663.81Probable glycerol-3-phosphate acyltransferase 8 OS... [more]
GPAT5_ARATH1.897e-6961.72Glycerol-3-phosphate acyltransferase 5 OS=Arabidop... [more]
GPAT7_ARATH7.718e-6356.94Glycerol-3-phosphate acyltransferase 7 OS=Arabidop... [more]
GPAT1_ARATH4.682e-6050.71Glycerol-3-phosphate acyltransferase 1 OS=Arabidop... [more]
GPAT3_ARATH5.750e-4243.46Probable glycerol-3-phosphate acyltransferase 3 OS... [more]
GPAT2_ARATH1.281e-4141.28Probable glycerol-3-phosphate acyltransferase 2 OS... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00600 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00600 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623509 ID=BQ623509; Name=BQ623509; organism=Citrus sinensis; type=EST; length=631bp
TTTGGATGCCAATTGGTATCATATTATCAATTCTCAGAGTCTATACAAAT
ATCCCTTTGCCGGAACGATTGGCTTGGTACAATTACAAGCTTTTGGGCAT
CAAGGTTATCGTTAAGGGTACCCCACCACCAGCACCCAAAAATGGCCAAA
GTGGTGTCCTTTTTATATGCAACCATCGCACTGTTTTAGACCCTGTGGTC
ACAGCCGTTGCCCTAGGACGAAAAATTAGTTGTGTCACATATAGTATTAG
CAAGTTCACTGAAATAATTTCACCCATTAAAGCTGTTGCCTTGTCAAGGG
AAAGAGAGAAAGATGCAGCTCACATCAAGCAATTGCTTGAAGAAGGTGAC
TTGGTGATCTGCCCCGAGGGAACAACCTGCAGGGAGCCTTTTCTTTTACG
ATTCAGTGCACTGTTTGCTGAGCTTACCGATAGAATTGTGCCGGTTGCTA
TCAACACTAAGCAAAGTGTGTTTCATGGAACCACAGTACGTGGGCACAAA
TTGTTGGATCCTTACTATGTGTTCATGAATCCAAGGCCAACTTATGAGAT
CACATTCTTGAATCAGCTGCCGCCGGAGCTGACAGTGAAAGGCGGCAAAT
CAGCCATCCAAGTTGCTAATTACATTCAAAG
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