BQ623524
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.032e-43 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK Sbjct: 173 SFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245 HSP 2 Score: 50.447 bits (119), Expect = 1.032e-43 Identity = 21/22 (95.45%), Postives = 22/22 (100.00%), Query Frame = 3 Query: 3 EGYRIAGGPLGEVTDPLYPGGS 68 EGYRIAGGPLGEVTDP+YPGGS Sbjct: 152 EGYRIAGGPLGEVTDPIYPGGS 173
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.282e-43 Identity = 70/73 (95.89%), Postives = 72/73 (98.63%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPLGLADD EAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 192 SFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 HSP 2 Score: 50.0618 bits (118), Expect = 2.282e-43 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 3 EGYRIAGGPLGEVTDPLYPGGSL*SIG 83 EGYR+AGGPLGEV DPLYPGGS +G Sbjct: 171 EGYRVAGGPLGEVVDPLYPGGSFDPLG 197
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.470e-42 Identity = 67/73 (91.78%), Postives = 71/73 (97.26%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPLGLA+DPE AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 192 SFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 HSP 2 Score: 49.6766 bits (117), Expect = 5.470e-42 Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 3 EGYRIAGGPLGEVTDPLYPGGSL*SIG 83 EGYR+AGGPLGE+ DPLYPGGS +G Sbjct: 171 EGYRVAGGPLGEIVDPLYPGGSFDPLG 197
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.102e-39 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 AFDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 78 AFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150 HSP 2 Score: 41.5874 bits (96), Expect = 1.102e-39 Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 3 Query: 3 EGYRIAGGPLGEVTDPLYPGGSL*SIG 83 EGYR+ GGPLGE DPLYPG + +G Sbjct: 57 EGYRVGGGPLGEGLDPLYPGDAFDPLG 83
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.033e-39 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 AFDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 194 AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266 HSP 2 Score: 38.1206 bits (87), Expect = 9.033e-39 Identity = 16/27 (59.26%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 3 EGYRIAGGPLGEVTDPLYPGGSL*SIG 83 EGYR+ GG LGE DPL PGG+ +G Sbjct: 173 EGYRVGGGTLGEGLDPLLPGGAFDPLG 199
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.522e-38 Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPL DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 52 SFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124 HSP 2 Score: 38.5058 bits (88), Expect = 4.522e-38 Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3 Query: 3 EGYRIAG-GPLGEVTDPLYPGGS 68 EGYR+AG GPLGE D LYPGGS Sbjct: 30 EGYRVAGDGPLGEAEDLLYPGGS 52
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.083e-36 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 193 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 2.412e-36 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 189 SFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.114e-36 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 134 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 206
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.114e-36 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 Query: 67 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 285 +FDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK Sbjct: 183 SFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 255 The following BLAST results are available for this feature:
BLAST of BQ623524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623524 ID=BQ623524; Name=BQ623524; organism=Citrus sinensis; type=EST; length=519bpback to top |