BQ623541

Overview
NameBQ623541
Unique NameBQ623541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623541 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 1.753e-89
Identity = 141/161 (87.58%), Postives = 150/161 (93.17%), Query Frame = 3
Query:   42 HGRGTPRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLNLGVKTGLPYIFHSKASNPFVNLKKEYKGIFWQEDIIPFFQAVTLPKECTTVQECYIELSKQVKEKLSKVDPYFDKLADAMVTWIEAWDELN 524
            H R T RYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHL LG+KTGLPYI+HSKASNPFVNLKKEY GIFWQE+IIPFFQA TLPKECTTVQ+CY+ELSKQVK+KLS +DPYF KL +AMVTWIEAWDELN
Sbjct:  183 HERNT-RYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLGLGIKTGLPYIWHSKASNPFVNLKKEYNGIFWQEEIIPFFQAATLPKECTTVQQCYLELSKQVKKKLSSIDPYFTKLGEAMVTWIEAWDELN 342          

HSP 2 Score: 42.3578 bits (98), Expect = 1.753e-89
Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 2
Query:    2 NIPDYDAPTQLVKPRERNT 58
            NIPDYDAPTQLVKP ERNT
Sbjct:  169 NIPDYDAPTQLVKPHERNT 187          
BLAST of BQ623541 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.287e-89
Identity = 138/156 (88.46%), Postives = 148/156 (94.87%), Query Frame = 3
Query:   60 RYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLNLGVKTGLPYIFHSKASNPFVNLKKEYKGIFWQEDIIPFFQAVTLPKECTTVQECYIELSKQVKEKLSKVDPYFDKLADAMVTWIEAWDELNP 527
            RYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHL LGVKTGLPYI+HSKASNPFVNLKKEYKGI+WQE+IIPF Q+ TLPK+CT+VQ+CY+ELSKQVKEKLS +DPYF KLADAMVTWIEAWDELNP
Sbjct:  192 RYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNP 347          

HSP 2 Score: 44.2838 bits (103), Expect = 2.287e-89
Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 2
Query:    2 NIPDYDAPTQLVKPRERNT 58
            NIPDYDAPTQLVKPRERNT
Sbjct:  173 NIPDYDAPTQLVKPRERNT 191          
BLAST of BQ623541 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 2.736e-87
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 3
Query:   60 RYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLNLGVKTGLPYIFHSKASNPFVNLKKEYKGIFWQEDIIPFFQAVTLPKECTTVQECYIELSKQVKEKLSKVDPYFDKLADAMVTWIEAWDELNP 527
            RYVD V+TIPKGTLFPMCGMNLAFDR LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHL+LGVKTGLPYI+HSKASNPFVNLKKEYKGIFWQEDIIPFFQ VT+PK+C TVQ+CYI LS QVKEKL  +DPYF KL DAMVTWIEAWDELNP
Sbjct:  198 RYVDAVMTIPKGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTIPKDCDTVQKCYIYLSGQVKEKLGTIDPYFVKLGDAMVTWIEAWDELNP 353          

HSP 2 Score: 41.2022 bits (95), Expect = 2.736e-87
Identity = 17/18 (94.44%), Postives = 18/18 (100.00%), Query Frame = 2
Query:    2 NIPDYDAPTQLVKPRERN 55
            NIPDYDAPTQLVKP+ERN
Sbjct:  179 NIPDYDAPTQLVKPKERN 196          
BLAST of BQ623541 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 2.294e-86
Identity = 137/161 (85.09%), Postives = 148/161 (91.93%), Query Frame = 3
Query:   42 HGRGTPRYVDMVLTIPKGTLFPMCGMNLAFDRHLIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVICDHLNLGVKTGLPYIFHSKASNPFVNLKKEYKGIFWQEDIIPFFQAVTLPKECTTVQECYIELSKQVKEKLSKVDPYFDKLADAMVTWIEAWDELN 524
            H R T R+VD VLTIPKG+LFPMCGMNLAF+R LIGPAMYFGLMGDGQPIGRYDDMWAGWC KVICDHL  GVKTGLPYI+HSKASNPFVNLKKEYKGIFWQE+IIPFFQA TL K+CT+VQ+CYIELSKQVKEKL  +DPYF KLADAMVTW+EAWDE+N
Sbjct:  186 HERNT-RFVDAVLTIPKGSLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGYGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQAATLSKDCTSVQKCYIELSKQVKEKLGTIDPYFIKLADAMVTWVEAWDEIN 345          

HSP 2 Score: 42.3578 bits (98), Expect = 2.294e-86
Identity = 18/19 (94.74%), Postives = 18/19 (94.74%), Query Frame = 2
Query:    2 NIPDYDAPTQLVKPRERNT 58
            NIPDYDAPTQLVKP ERNT
Sbjct:  172 NIPDYDAPTQLVKPHERNT 190          
The following BLAST results are available for this feature:
BLAST of BQ623541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UPTG1_SOLTU1.753e-8987.58Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG2_SOLTU2.287e-8988.46Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
UPTG_MAIZE2.736e-8788.46Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG_PEA2.294e-8685.09Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00632 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00632 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623541 ID=BQ623541; Name=BQ623541; organism=Citrus sinensis; type=EST; length=685bp
CAACATTCCGGACTATGATGCACCTACACAGCTTGTGAAGCCACGGGAGA
GGAACACCTAGGTATGTGGATATGGTTTTGACCATTCCTAAGGGCACTCT
CTTCCCCATGTGTGGTATGAATTTGGCATTTGACCGTCACTTGATTGGCC
CTGCAATGTATTTTGGCCTCATGGGCGACGGTCAGCCAATTGGACGTTAT
GATGATATGTGGGCTGGCTGGTGCACCAAGGTGATATGTGACCATTTGAA
TTTGGGAGTAAAGACTGGTCTGCCTTATATCTTCCACAGCAAAGCAAGCA
ACCCGTTTGTGAACCTAAAGAAAGAGTACAAGGGCATCTTCTGGCAGGAA
GATATCATCCCATTCTTCCAAGCCGTGACACTTCCAAAAGAGTGCACTAC
TGTGCAAGAGTGCTACATTGAACTGTCGAAACAGGTCAAGGAAAAGCTTA
GCAAAGTAGATCCCTACTTCGACAAGTTGGCAGATGCCATGGTGACCTGG
ATTGAAGCGTGGGATGAGCTTAACCCAGCTGGAGCTGCAGTGGCCAATGG
CAAAGCCTAAGTAGAGAAACTTTTGATTAACTGGGGACGACAATATTTTC
CTTCATGTTAGGGAGTAATTTATAGTCATTAGCTGCTGTATTTTTACAAA
GTTTTATGCACTTTTTGGCACCCAATTTGGTCCGA
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