BQ623548

Overview
NameBQ623548
Unique NameBQ623548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length675
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:754..1425. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44
Identity = 85/98 (86.73%), Postives = 91/98 (92.86%), Query Frame = 1
Query:    1 DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 294
            D+IPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGL++VDHQLA DKRTRP VKKMAK Q YFFKEF+RAI +LSENNPLTG+KGEIRK CNLANK H
Sbjct:  233 DSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMAKDQAYFFKEFTRAIQILSENNPLTGSKGEIRKQCNLANKNH 330          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.697e-27
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 1
Query:   10 PDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 285
            PDP AV Y RNDR TPMV+DN YY+NI+ +KGL+++D +LATD RT P+V KMA   +YF ++FSR + LLSE NPLTG +GEIRK C   N
Sbjct:  236 PDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDPRTAPFVAKMAADNNYFHEQFSRGVRLLSETNPLTGDQGEIRKDCRYVN 327          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   34 VRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 285
            V ND  TP   DN Y++NI    GL+  DH L +D RTRP+V+  A+ Q  FF +F+ A+  LS +  LTG +GEIR+ C+  N
Sbjct:  245 VFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYARDQSRFFNDFAGAMQKLSLHGVLTGRRGEIRRRCDAIN 328          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.437e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
Query:   34 VRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 285
            V ND  TP   DN YY+N+    GL+  DH L +D RTR +V   AK+QD FFK+F++A+  LS     TG +GEIR+ C+  N
Sbjct:  233 VFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDPRTRYFVDLYAKNQDLFFKDFAKAMQKLSLFGIQTGRRGEIRRRCDAIN 316          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.622e-11
Identity = 31/82 (37.80%), Postives = 55/82 (67.07%), Query Frame = 1
Query:   43 DRGTPMVLDNNYYRNILDNKGLMMVDHQLAT-DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 285
            D  TP   DN+Y++N++  KGL+  D  L T +K+++  V+  A++Q+ FF++F++++  +   +PLTG KGEIR++C   N
Sbjct:  252 DFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYAENQEAFFEQFAKSMVKMGNISPLTGAKGEIRRICRRVN 333          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1
Query:   40 NDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 285
            ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+  N
Sbjct:  241 NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 1
Query:   31 YVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 276
            +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  256 FVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
The following BLAST results are available for this feature:
BLAST of BQ623548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PER42_ARATH2.428e-4486.73Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH2.697e-2760.87Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH1.437e-1245.24Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER31_ARATH1.437e-1246.43Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER72_ARATH4.622e-1137.80Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER6_ARATH7.883e-1141.46Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER29_ARATH7.883e-1140.24Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00639 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00639 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623548 ID=BQ623548; Name=BQ623548; organism=Citrus sinensis; type=EST; length=675bp
GATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGG
CACACCCATGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACA
AGGGCTTGATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGA
CCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATT
TTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAA
AGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAG
TCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAGTTAATAGCTCCAAA
TTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCT
CCCAATAAGATGGTTTTTCTAGATCGGTTTGTTTCCTGTGAGATGTTCGT
ATTACTGCTATTATGTTCCTTAGATGTACCGTCCAATGTTTAAGCCTAGG
CTTTCCTTTTCCTCGATGGTGTGAGCTTGATGTTATTAATATTCAGTAAT
GGCAGTGGTAGATGAGGGAATGTAATGTATGTATGCAGGGATGGTGGTAT
GGTGCATGGATTTGTATAATGATGATAATTGATGATTCATGCCAATGGCA
TAAACTTCTAAAAAAAAAAAAAAAA
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