BQ623561

Overview
NameBQ623561
Unique NameBQ623561
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4313 contig Csv1_Contig4313:77..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.111e-31
Identity = 64/137 (46.72%), Postives = 88/137 (64.23%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V+ +APS PGV  +GGDMF S+P ADAIFMKW+   W+DD C  +++NCY+ALPA GK+I  E +LP+  + S  T++ + GDI +M  +   GK RTE++F+ L     F   R     Y   ++EF K
Sbjct:  224 INFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDI-IMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.867e-30
Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            +NFDLP V++EAP  PGV H+GGDMF S+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++  + + + +   D+ +M  +   GK R E+EF++L   AGF   +A Y+      +EF K
Sbjct:  229 VNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDM-IMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.530e-29
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  204 INFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.530e-29
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V+ +AP  PG+ H+GGDMF S+P  DAIFMKW+   W+D+ C  +++NCY ALP  GK+I  E +LP+  + S  T+ ++  D+ +   +   GK RTE+EF+ L  +AGF   + F   +   ++EF K
Sbjct:  204 INFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDV-ITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.530e-29
Identity = 61/137 (44.53%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V+ +APS PGV H+GGDMF SIP ADA+FMKW+   W+D+ C   ++NCY+ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF   +     +   ++EF K
Sbjct:  228 INFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDV-IMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.530e-29
Identity = 63/137 (45.99%), Postives = 86/137 (62.77%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDL  V+ +AP+ PGV H+G DMF S+P ADAIFMKW+   W+D+ C   ++NCY+ALPA GK++  E +LP+  + S  T+  +  DI VM  +   GK RTE+EF+ L   AGF   R     Y   ++EF K
Sbjct:  224 INFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDI-VMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.609e-29
Identity = 61/138 (44.20%), Postives = 89/138 (64.49%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIP-AADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            IN+DLP V++EAP  PGV H+GGDMF S+P   DAI MKW+L  W+D+ C  +++NCY ALP  GK++  E VLP+ S+ + R + +   D+ +M  +   GK R E+EF++L  +AGF   +A Y+      +EF K
Sbjct:  232 INYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDM-IMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.609e-29
Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V++EAP  PGV H+GGDMFKS+PA DAI MKW+L  W+D  C  +++NCY ALP  GK+I  E VLP ++    + + +   D+ +M  +   G+ R E+EF  L   AGF   +A Y+      +EF K
Sbjct:  227 INFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDM-IMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.408e-29
Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLRAFYVDYFHTLLEFQK 413
            INFDLP V+A+AP+ PGV ++GGDMF S+P ADA+FMKW+   W+D+ C   ++NCY ALP  GK+I  E +LP   + S  T+ ++  D+ +M  +   GK RT++EF+ L   AGF         +   ++EF+K
Sbjct:  227 INFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDV-IMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.408e-29
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 3
Query:    3 INFDLPEVVAEAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGFPHLR 368
            INF+LP VV +APS  GV H+GGDMF S+P  DAIFMKW+   W+DD C+ +++NCY+ALP  GK+I  E VLP+  + S  T+ ++  D+ VM  +   GK RTE+EF+ L   AGF   R
Sbjct:  215 INFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDV-VMLAHNPGGKERTEKEFEALAKGAGFKEFR 335          
The following BLAST results are available for this feature:
BLAST of BQ623561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
COMT1_CAPCH8.111e-3146.72Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_MAIZE6.867e-3044.53Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT2_CHRAE1.530e-2943.07Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.530e-2943.07Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_MEDSA1.530e-2944.53Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPAN1.530e-2945.99Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
OMT1_ORYSJ2.609e-2944.20Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF2.609e-2945.26Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT2_POPTM3.408e-2943.07Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_COFCA3.408e-2950.00Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00652 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00652 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623561 ID=BQ623561; Name=BQ623561; organism=Citrus sinensis; type=EST; length=641bp
GGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAGCTCCAAGTATCCCT
GGAGTGACCCATATTGGTGGGGACATGTTTAAGTCCATTCCTGCCGCTGA
TGCTATCTTTATGAAGTGGGTTTTAACTACATGGACTGACGATGAATGCA
AGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGGCAGGAGGAAAACTG
ATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAAACGAGAGTCAGAGGAC
GCGTGCTCTCTTAGAAGGGGACATTTTTGTAATGACCATCTACAGGGCCA
AAGGTAAACACAGGACTGAACAAGAGTTTAAGCAACTTGGTCTCTCTGCT
GGTTTTCCACACTTGAGAGCTTTTTATGTCGATTATTTTCACACTCTTCT
TGAGTTCCAAAAGTAATTTTAGTTTCTGGATCCTTAAAAGACTTGGGGAA
TATTTGTGATGGACTGTGGTTGCCTAGGATGGAATAACTTGCTATGAATT
ATAAATGTTGAGTAGGCGGTTAGCGCTAGCTGCCTACCAAAAAAAAAAAA
GAAACGATTTATCATTAACATAAATTATTGAGCTCATATTTCATAGACAT
GTATTTTGTATATTGAGCTCACTCCATTGAACTCAAAAAAA
back to top