BQ623570

Overview
NameBQ623570
Unique NameBQ623570
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623570 vs. ExPASy Swiss-Prot
Match: DR206_PEA (Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.622e-62
Identity = 112/180 (62.22%), Postives = 139/180 (77.22%), Query Frame = 2 
Query:   32 MLAIFLLFLISASSDAHTQKIRARKPCKHLVFYFHDVIYNGKNSRNATSAIVGSPVWGNKTTLAGQSHFGDLVVFDDPITLDNNLHSTPVGRAQGFYIYDKKEIFTAWLGFSFVFNSTEHKGSINFAGADPLMNKTRDVSVIGGTGDFLMARGIATLMTDAFEGEVYFRLRTDIKLYECW 571
            +L +F+  ++ A S A   K +  KPCK+LVFYFHD++YNGKN+ NATSAIV +P   + T LA QSHFG+++VFDDPITL ++L S  VGRAQGFYIYD K  +T+WL F+FV NST H+G+I FAGADP++ KTRD+SV GGTGDF M RGIAT+ TDAFEGE YFRL   IK +ECW
Sbjct:    5 LLVLFVFVMLFALSSAIPNKRKPYKPCKNLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATITTDAFEGEAYFRLGVYIKFFECW 184
The following BLAST results are available for this feature:
BLAST of BQ623570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR206_PEA1.622e-6262.22Disease resistance response protein 206 OS=Pisum s... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00661 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00661 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623570 ID=BQ623570; Name=BQ623570; organism=Citrus sinensis; type=EST; length=701bp
TATTGATCTAGCAATGGATGCTAAAACACTAATGCTAGCAATCTTTCTCC
TCTTCCTGATCTCAGCATCCTCCGATGCACACACGCAAAAAATCCGAGCT
CGAAAACCTTGTAAGCATTTAGTGTTTTACTTCCACGACGTTATTTACAA
TGGCAAAAACTCTCGCAATGCAACTTCAGCCATTGTTGGCTCACCAGTTT
GGGGCAACAAGACCACATTGGCTGGCCAAAGCCATTTTGGTGACTTAGTA
GTGTTTGATGATCCCATTACACTTGACAACAATTTACATTCAACACCAGT
TGGTCGAGCACAAGGGTTTTACATTTATGACAAGAAAGAAATTTTTACAG
CTTGGCTTGGCTTCTCCTTTGTTTTCAATTCTACAGAGCATAAGGGAAGC
ATAAACTTTGCTGGGGCTGATCCTTTGATGAATAAGACTAGAGATGTTTC
AGTGATTGGTGGCACTGGTGATTTTCTCATGGCTAGAGGAATTGCCACTT
TGATGACTGATGCCTTTGAAGGAGAGGTTTATTTTCGGCTTCGAACTGAT
ATTAAATTGTATGAATGTTGGTGACATTATTGATTTTGTGCCCTCTATAA
TTTTTTTTCACTTGGTGATGTACTTGTCTCTTTTCAAATCAATGTTTTAT
TGTTCCACAAGGGGTGGGTTAATCAAAAAAAAAAAAAAAAAAAAAAAACT
C
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