BQ623616

Overview
NameBQ623616
Unique NameBQ623616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig31 contig Csv1_Contig31:1..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR15_ARATH (Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.516e-54
Identity = 111/166 (66.87%), Postives = 134/166 (80.72%), Query Frame = 2
Query:   35 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGEPQANGKSGLL--KRKLIDDIQASSVPLSFSS 526
            S ELHVLAVDDS+VDRK+IERLL+IS+CKVT VESGTRALQYLGLDG+  + G   LKVNLI+TDY+MPG+TGYELLKKIKESS  RE+PVVIMSSE++  +I+ C+ EGAEE+++KPVKL+DVKRLK+ IMRG     GK+  L  KR L +DI +S    S SS
Sbjct:   15 SPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSS 180          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR6_ARATH (Two-component response regulator ARR6 OS=Arabidopsis thaliana GN=ARR6 PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 7.703e-54
Identity = 107/146 (73.29%), Postives = 129/146 (88.36%), Query Frame = 2
Query:   44 LHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGEPQANGKSGLLKRKL 481
            LHVLAVDDS+VDRK IERLL++SSCKVT V+S TRALQYLGLD E+ +VGF+ LKVNLI+TDY+MPGMTGYELLKKIKESS FREVPVVIMSSE++L +ID CLEEGAE++++KPVKLSDVKRL+D +M+ E  +  KS + KR+L
Sbjct:   25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLSDVKRLRDSLMKVEDLSFTKS-IQKREL 169          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR5_ARATH (Two-component response regulator ARR5 OS=Arabidopsis thaliana GN=ARR5 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 107/149 (71.81%), Postives = 131/149 (87.92%), Query Frame = 2
Query:   38 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQ-SNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGEPQANGKSGLLKRKL 481
            K LHVLAVDDS VDRK IERLL++SSCKVT V+S TRALQYLGLDGE  S+VGF+ LK+NLI+TDY+MPGMTGYELLKKIKESS FRE+PVVIMSSE++L +ID CLEEGAE++++KPVKL+DVKRL+D +M+ E +A  K+ + KR+L
Sbjct:   23 KLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLADVKRLRDSLMKAEERA-FKNIMHKREL 170          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR4_ARATH (Two-component response regulator ARR4 OS=Arabidopsis thaliana GN=ARR4 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 5.521e-52
Identity = 107/159 (67.30%), Postives = 133/159 (83.65%), Query Frame = 2
Query:   41 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGEPQANGKSGLLKRKLIDDIQA--SSVP 511
            E+HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD E+++  FD LKV+LIITDY MPGMTGYELLKKIKESS FREVPVVIMSSE+VLT+ID CLEEGA+++++KPVKL+DVKRL+ H+ +    +NG     KRKL +D  +  SS+P
Sbjct:   33 EVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSNGN----KRKLPEDSSSVNSSLP 187          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR7_ARATH (Two-component response regulator ARR7 OS=Arabidopsis thaliana GN=ARR7 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.098e-51
Identity = 107/156 (68.59%), Postives = 126/156 (80.77%), Query Frame = 2
Query:   41 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGE-PQANGKSGLLKRKLIDDIQASS 505
            ELHVLAVDDS VDRK+IERLL+ISSCKVT VESGTRALQYLGLDG +       LKVNLI+TDY+MPG++GY+LLKKIKESS FREVPVVIMSSE++L +I  CL+EGAEE+++KPVKL+DVKR+K  IMR E  +    S   KRKL +D   SS
Sbjct:   23 ELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHSNKRKLQEDSDTSS 178          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR3_ARATH (Two-component response regulator ARR3 OS=Arabidopsis thaliana GN=ARR3 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 9.745e-49
Identity = 95/133 (71.43%), Postives = 120/133 (90.23%), Query Frame = 2
Query:   35 SKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMR 433
            S ++HVLAVDDS VDR +IERLL+I+SCKVTAV+SG RAL++LGLD +++ V FD LKV+LIITDY MPGMTGYELLKKIKES+ F+EVPVVIMSSE+V+T+ID CLEEGAE++++KPVKL+DVKRL+ ++ R
Sbjct:   30 SDQVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR9_ARATH (Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41
Identity = 90/165 (54.55%), Postives = 120/165 (72.73%), Query Frame = 2
Query:   41 ELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL----DGEQSN------VGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMRGEPQANGKSGLLKRKLIDDIQASS 505
            + HVLAVDDS  DRKLIERLLQ SSC+VT V+SG++AL++LGL    D    N      V    ++VNLIITDY MPGMTGY+LLKK+KESS FR++PVVIMSSE+V  +I  CLEEGAEE+ +KPV+L+D+ +LK H+M+ +         LK + +++I+ +S
Sbjct:    8 QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVNHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEEFFLKPVRLADLNKLKPHMMKTK---------LKNQKLEEIETTS 163          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR17_ARATH (Two-component response regulator ARR17 OS=Arabidopsis thaliana GN=ARR17 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.154e-41
Identity = 83/137 (60.58%), Postives = 114/137 (83.21%), Query Frame = 2
Query:   23 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGL-DGEQSNVGFDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIM 430
            ++   +ELHVLAVDD+ +DRKL+ER+L+ISSCKVT  E+G RAL+YLGL D +Q++   + +KVNLIITDY MPGMTG+ELLKK+KESS  +EVPVVI+SSE++ T+I+ CL  GA+ ++ KP+KLSDV++LK H++
Sbjct:   13 LSSMEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLSDVEKLKCHLL 149          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR8_ARATH (Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.666e-40
Identity = 83/145 (57.24%), Postives = 110/145 (75.86%), Query Frame = 2
Query:   23 VAECSKELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVG--------FDALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIMR 433
            V E   + HVLAVDDS  DRK+IERLLQ SSC+VT V+SG++AL++LGL  + ++             +++NLIITDY MPGMTGY+LLKK+KES+ FR +PVVIMSSE+V  +I  CLEEGAEE+ +KPVKL+D+ +LK H+M+
Sbjct:    2 VMETESKFHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFLKPVKLADLTKLKPHMMK 146          
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Match: ARR16_ARATH (Two-component response regulator ARR16 OS=Arabidopsis thaliana GN=ARR16 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.331e-40
Identity = 81/134 (60.45%), Postives = 108/134 (80.60%), Query Frame = 2
Query:   38 KELHVLAVDDSYVDRKLIERLLQISSCKVTAVESGTRALQYLGLDGEQSNVGF---DALKVNLIITDYTMPGMTGYELLKKIKESSVFREVPVVIMSSEDVLTQIDSCLEEGAEEYIVKPVKLSDVKRLKDHIM 430
            +ELHVLAVDD+ +DRKL+ERLL+IS CKVT  E+  RAL+YLGL  +  ++     + +KV+LIITDY MPGMTG+ELLKK+KESS  REVPVVIMSSE++ T+I+ CL  GA+ ++ KP+KL+DV++LK H+M
Sbjct:   27 EELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLM 160          
The following BLAST results are available for this feature:
BLAST of BQ623616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ARR15_ARATH4.516e-5466.87Two-component response regulator ARR15 OS=Arabidop... [more]
ARR6_ARATH7.703e-5473.29Two-component response regulator ARR6 OS=Arabidops... [more]
ARR5_ARATH2.241e-5371.81Two-component response regulator ARR5 OS=Arabidops... [more]
ARR4_ARATH5.521e-5267.30Two-component response regulator ARR4 OS=Arabidops... [more]
ARR7_ARATH2.098e-5168.59Two-component response regulator ARR7 OS=Arabidops... [more]
ARR3_ARATH9.745e-4971.43Two-component response regulator ARR3 OS=Arabidops... [more]
ARR9_ARATH1.154e-4154.55Two-component response regulator ARR9 OS=Arabidops... [more]
ARR17_ARATH1.154e-4160.58Two-component response regulator ARR17 OS=Arabidop... [more]
ARR8_ARATH1.666e-4057.24Two-component response regulator ARR8 OS=Arabidops... [more]
ARR16_ARATH6.331e-4060.45Two-component response regulator ARR16 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00707 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00707 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623616 ID=BQ623616; Name=BQ623616; organism=Citrus sinensis; type=EST; length=595bp
TCCTTTTTGGGCAATGGCAACAGTGGCTGAATGTTCTAAGGAGCTACATG
TTCTTGCTGTCGACGATAGTTATGTTGATCGCAAGCTTATTGAGAGATTG
CTTCAGATATCCTCATGTAAAGTGACGGCTGTGGAGAGTGGAACAAGAGC
TTTACAGTATCTGGGTTTAGATGGAGAGCAAAGCAATGTTGGTTTTGATG
CTTTGAAGGTGAATCTGATCATTACAGATTATACCATGCCTGGGATGACT
GGATATGAACTACTCAAAAAGATCAAGGAATCATCTGTTTTCAGAGAGGT
TCCGGTAGTGATCATGTCTTCTGAGGATGTCTTAACTCAGATTGATAGTT
GTTTGGAAGAAGGGGCAGAGGAATACATAGTCAAGCCAGTGAAACTATCA
GACGTTAAACGGCTAAAAGATCACATAATGAGAGGAGAACCACAGGCAAA
TGGCAAAAGTGGGCTTCTCAAGAGGAAACTAATTGATGATATTCAGGCCT
CCTCGGTTCCCCTATCATTCTCATCTTTCGGTTGCTTGGGATCTAGAATC
TTCCCACTACCATCTTCACTGTCTTCACCCAATTGTCCCTTCAAG
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