BQ623638
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_BRARA (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica rapa GN=PSAH PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 6.560e-39 Identity = 78/109 (71.56%), Postives = 86/109 (78.90%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +SL G KL +KP+RQSF+PKS +AGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR S L Y SA+++GD Sbjct: 17 KGLGGSSLTGAKLFIKPSRQSFKPKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSASSTGD 125
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH2_ARATH (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana GN=PSAH2 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.553e-38 Identity = 77/109 (70.64%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +SLAG KL +KP+RQSF+ KS +AGAVVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR S L Y SA ++GD Sbjct: 17 KGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANSTGD 125
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH1_ARATH (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana GN=PSAH1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.237e-37 Identity = 75/109 (68.81%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +SLAG KL++KP+R SF+PKS +A VVAKYGDKSVYFDLEDLGNTTGQWD+YGSDAPSPYN LQSKFFETFAAPFTKR S L Y SAT++G+ Sbjct: 17 KGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSATSTGE 125
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_SPIOL (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea GN=PSAH PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 8.711e-36 Identity = 72/109 (66.06%), Postives = 82/109 (75.23%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +S+AGTKL +KP RQSF+ + ++GA+VAKYGDKSVYFDLED+ NTTGQWD+YGSDAPSPYNSLQSKFFETFAAPFTKR S L Y SA A D Sbjct: 16 KGLAGSSIAGTKLHIKPARQSFKLNNVRSGAIVAKYGDKSVYFDLEDIANTTGQWDVYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSANAPQD 124 HSP 2 Score: 23.0978 bits (48), Expect = 8.711e-36 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 1 VQPATIKGLGGS 36 VQP T+KGL GS Sbjct: 10 VQPTTLKGLAGS 21
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_MAIZE (Photosystem I reaction center subunit VI, chloroplastic OS=Zea mays GN=PSAH PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 2.260e-31 Identity = 71/110 (64.55%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 20 KALEAASLAGTKLTV-KPTRQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +S++G KL V +P+ +S R +A AVVAKYGDKSVYFDL+D+GNTTGQWDLYGSDAPSPYN LQSKFFETFAAPFTKR S LAY SA+AS D Sbjct: 15 KGLAGSSISGRKLAVARPSARSIRRP--RAAAVVAKYGDKSVYFDLDDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLLLGGGSLLAYVSASASPD 122
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSJ (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. japonica GN=PSAH PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.499e-30 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +S++G KL V+P+ R + RP++ AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKR S +AY SA+AS D Sbjct: 13 KGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASASPD 122
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_ORYSI (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. indica GN=PSAH PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.499e-30 Identity = 69/114 (60.53%), Postives = 81/114 (71.05%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPT-----RQSFRPKSFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +S++G KL V+P+ R + RP++ AVVAKYG+KSVYFDLED+GNTTGQWDLYGSDAPSPYN LQSKFFETFA PFTKR S +AY SA+AS D Sbjct: 13 KGLAGSSISGRKLAVRPSPRALCRTTRRPRA----AVVAKYGEKSVYFDLEDIGNTTGQWDLYGSDAPSPYNPLQSKFFETFAGPFTKRGLLLKFLLLGGGSLVAYVSASASPD 122
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_HORVU (Photosystem I reaction center subunit VI, chloroplastic OS=Hordeum vulgare GN=PSAH PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.369e-29 Identity = 65/111 (58.56%), Postives = 78/111 (70.27%), Query Frame = 2 Query: 20 KALEAASLAGTKLTVKPTRQSFRPKSFKA--GAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRXXXXXXXXXXXXSTLAYFSATASGD 346 K L +S++G KL V+P+ + + +A AVVAKYG+KSVYFDL+D+ NTTGQWDLYGSDAPSPYN LQSKFF TFAAPFTKR S +AY SA+AS D Sbjct: 13 KGLSGSSISGRKLAVRPSSAAVSRSTRRARGAAVVAKYGEKSVYFDLDDIANTTGQWDLYGSDAPSPYNGLQSKFFNTFAAPFTKRGLLLKFLLIGGGSLVAYVSASASPD 123 HSP 2 Score: 23.0978 bits (48), Expect = 1.369e-29 Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 1 VQPATIKGLGGS 36 VQPA +KGL GS Sbjct: 7 VQPAAVKGLSGS 18
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Match: PSAH_PEA (Photosystem I reaction center subunit VI (Fragment) OS=Pisum sativum GN=PSAH PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.278e-14 Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 2 Query: 122 KYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQ 229 KYGDKSVYFDLED+GNTTGQWDLYGSDAPSPY+ LQ Sbjct: 1 KYGDKSVYFDLEDIGNTTGQWDLYGSDAPSPYSXLQ 36 The following BLAST results are available for this feature:
BLAST of BQ623638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623638 ID=BQ623638; Name=BQ623638; organism=Citrus sinensis; type=EST; length=408bpback to top |