BQ623647

Overview
NameBQ623647
Unique NameBQ623647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length241
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.831e-41
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.831e-41
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.392e-41
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  157 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.392e-41
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  157 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.392e-41
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  157 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_ATRNU (S-adenosylmethionine synthetase 1 OS=Atriplex nummularia GN=SAMS1 PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 2.392e-41
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  157 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.080e-41
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.329e-41
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  157 TEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 235
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.960e-41
Identity = 76/79 (96.20%), Postives = 79/79 (100.00%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFH 231
[Close]
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 9.090e-41
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 3 
Query:    3 TEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 239
            TEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH
Sbjct:  153 TEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 231
The following BLAST results are available for this feature:
BLAST of BQ623647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 466
Match NameE-valueIdentityDescription
METK_MESCR1.831e-41100.00S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK1_ELAUM1.831e-41100.00S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK4_ATRNU2.392e-4198.73S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_ATRNU2.392e-4198.73S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_ATRNU2.392e-4198.73S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_ATRNU2.392e-4198.73S-adenosylmethionine synthetase 1 OS=Atriplex numm... [more]
METK1_POPTR4.080e-4198.73S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK1_BETVU5.329e-4197.47S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK2_CATRO6.960e-4196.20S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_CARPA9.090e-4198.73S-adenosylmethionine synthetase OS=Carica papaya G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00738 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623647 ID=BQ623647; Name=BQ623647; organism=Citrus sinensis; type=EST; length=241bp
TTACCGAGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGC
AAGACACAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCC
TGTGAGAGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGA
CTAATGATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTT
ATTCCTGAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
back to top