BQ623648

Overview
NameBQ623648
Unique NameBQ623648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig33 contig Csv1_Contig33:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_ARATH (Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=At2g19940 PE=1 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 2.208e-67
Identity = 127/143 (88.81%), Postives = 134/143 (93.71%), Query Frame = 1
Query:    1 GIYSYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 429
            GI SYGVTRHRHVPEIEQGL+DVA SKVTVSFTPHLMPMIRGMQSTIYVEMAPGV  EDL QQLK SYE EEFVK+L++GVVPRTHNVRGSNYC M+VFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLG+PE TGLL+Q
Sbjct:  255 GISSYGVTRHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQ 397          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_ORYSJ (Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0617900 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.257e-54
Identity = 105/143 (73.43%), Postives = 120/143 (83.92%), Query Frame = 1
Query:    1 GIYSYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLLYQ 429
            GI++YG+  HRHVPEIEQGL++ A SKVT+SFTP+L+ M RGMQST++VEMAPGVT  DL Q LK +YE EEFVKLL    VP T +V GSNYC MNVF DRIPGRAIIISVIDNLVKGASGQA+QNLN+M+G PENTGL YQ
Sbjct:  269 GIHAYGIKGHRHVPEIEQGLSEAAESKVTISFTPNLICMKRGMQSTMFVEMAPGVTANDLYQHLKSTYEGEEFVKLLNGSSVPHTRHVVGSNYCFMNVFEDRIPGRAIIISVIDNLVKGASGQAVQNLNLMMGLPENTGLQYQ 411          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_RHORT (N-acetyl-gamma-glutamyl-phosphate reductase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=argC PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.798e-38
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 1
Query:    1 GIYSYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            GI++YGV  HRH PEIEQGL+      V V+FTPHLMPM RG+ STIY+    G     L Q L  +Y  E FV+++ +GV P T +VRGSN+ L+ V  DR+PGR I+  V DNLVKGASGQA+Q++N+MLGFPE  GL
Sbjct:  206 GIHAYGVGTHRHGPEIEQGLSLAVGRPVAVTFTPHLMPMNRGILSTIYLRATAGNDATTLRQALSAAYADEAFVRVVPEGVSPHTRHVRGSNFVLIGVHADRVPGRVIVTCVEDNLVKGASGQAIQDMNVMLGFPETLGL 345          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_DESRM (N-acetyl-gamma-glutamyl-phosphate reductase OS=Desulfotomaculum reducens (strain MI-1) GN=argC PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.485e-35
Identity = 74/137 (54.01%), Postives = 95/137 (69.34%), Query Frame = 1
Query:   10 SYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            +YGV  HRH PEIEQ L  +A + VTVSFTPHL PMIRG+ STIY  +   VT E+L    +  Y+ E FV++L  G+ P T  V GSN+C ++V  D    R I++S IDNL+KGA+GQA+QNLN+MLG PE+T L
Sbjct:  203 AYGVATHRHTPEIEQELALLAGNPVTVSFTPHLTPMIRGILSTIYASLINNVTTEELTAIYRQFYQGERFVRVLPAGMYPTTKGVAGSNHCDISVTVDVRTKRVIVLSAIDNLIKGAAGQAVQNLNVMLGLPEDTAL 339          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_OLICO (N-acetyl-gamma-glutamyl-phosphate reductase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=argC PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.464e-34
Identity = 73/140 (52.14%), Postives = 92/140 (65.71%), Query Frame = 1
Query:    1 GIYSYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            G ++YGV  HRH+ E++Q  +  A   V V+FTPHL PM RG+ STIYV    G T  DL + L   YE + FV +L  G  P + +VRGSN   + V  DR PGRAII+S +DNL KGASGQA+QN+N+MLGF E  GL
Sbjct:  206 GFHAYGVGHHRHMSELDQEFSKAAGKDVLVTFTPHLTPMNRGIYSTIYVRGRRGKTARDLHETLSKQYEKDPFVYVLPFGKTPNSRHVRGSNMTFIGVAEDRKPGRAIIVSTLDNLTKGASGQAVQNMNVMLGFAETLGL 345          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_GEOSM (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter sp. (strain M21) GN=argC PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.464e-34
Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    1 GIYSYGVTR-HRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            G  +YGV   HRH+PEIEQ L+ +A S + ++FTPHL+PM RG+ STIY + A  V   DL    +  Y+ E FV++L +GV+P T +VRGSN+C + +  D+  GR I+IS IDNLVKGASGQA+QN+N+M G PE  GL
Sbjct:  199 GFRAYGVGGVHRHIPEIEQELSLLAGSPLNITFTPHLVPMDRGILSTIYSQTAGSVKAADLIALYEAFYDGEPFVRVLPEGVLPSTAHVRGSNFCDIGITVDQRTGRVIVISAIDNLVKGASGQAVQNMNLMCGLPETLGL 339          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_STAS1 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=argC PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.218e-34
Identity = 72/138 (52.17%), Postives = 97/138 (70.29%), Query Frame = 1
Query:   10 SYGVTRHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGLL 423
            +Y + +H+H PEIEQ L+ +A  +V V+FTPHL+PM RG+ STIY+++    T EDL    K  YE + FV++   G  P+T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLN+M G+ ENTGLL
Sbjct:  200 AYAIGKHKHKPEIEQYLSLLAQQEVKVTFTPHLVPMTRGILSTIYIKLNHAFTNEDLHNLFKDYYEDKPFVRIRSLGQFPKTKEVYGSNYCDIGIYVDEENQTAILVSVIDNLVKGASGQAIQNLNLMYGWKENTGLL 337          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_GEOUR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter uraniireducens (strain Rf4) GN=argC PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.169e-34
Identity = 71/141 (50.35%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 GIYSYGVT-RHRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            G  +YGV   HRH+PEIEQ L+ +A  ++ +SFTPHL+PM RG+ STIY      V+  +L +  +  Y+ E FV++L +G  P T +VRGSN+C + +  D   GR +++S IDNL+KGASGQA+QN+NIM GFPEN GL
Sbjct:  199 GFKAYGVGGAHRHIPEIEQELSLLAGKQLKISFTPHLVPMDRGILSTIYATPTGAVSSAELLELYRAYYQGEAFVRILPEGSFPSTSHVRGSNFCDIGLAVDNRTGRVVVVSAIDNLIKGASGQAVQNMNIMNGFPENLGL 339          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_GEOSF (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter sp. (strain FRC-32) GN=argC PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.597e-33
Identity = 73/141 (51.77%), Postives = 99/141 (70.21%), Query Frame = 1
Query:    1 GIYSYGVTR-HRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            G  +YGV   HRH+PEIEQ L+ +A  ++T++FTPHL+PM RG+ STIY E A  V++  L +  +  Y  E FV++L +   P T  VRGSN+C + +  D+  GR +I+S IDNL+KGASGQA+QN+NIM GFPEN GL
Sbjct:  199 GFKAYGVGGVHRHIPEIEQELSLLAGKQLTITFTPHLVPMDRGILSTIYAEPAGEVSLAGLVELYRDFYHGEAFVRVLPENNFPSTAFVRGSNFCDIGLTVDKRTGRIVIVSAIDNLIKGASGQAIQNMNIMNGFPENLGL 339          
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Match: ARGC_GEOBB (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=argC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.086e-33
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 1
Query:    1 GIYSYGVTR-HRHVPEIEQGLTDVASSKVTVSFTPHLMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMLGFPENTGL 420
            G  +YGV   HRH+PEIEQ L+ +A + + ++FTPHL+PM RG+ STIY +    V   DL    +  Y+ E FV++L +GV+P T +VRGSN+C + +  D+  GR I+IS IDNLVKGASGQA+QN+N+M G PE  GL
Sbjct:  199 GFRAYGVGGVHRHIPEIEQELSLLAGNPLNITFTPHLVPMDRGILSTIYSQPTGSVKAADLIALYQAFYDGEPFVRVLPEGVLPSTAHVRGSNFCDIGITVDQRTGRVIVISAIDNLVKGASGQAVQNMNLMCGLPETLGL 339          
The following BLAST results are available for this feature:
BLAST of BQ623648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 353
Match NameE-valueIdentityDescription
ARGC_ARATH2.208e-6788.81Probable N-acetyl-gamma-glutamyl-phosphate reducta... [more]
ARGC_ORYSJ1.257e-5473.43Probable N-acetyl-gamma-glutamyl-phosphate reducta... [more]
ARGC_RHORT4.798e-3855.71N-acetyl-gamma-glutamyl-phosphate reductase OS=Rho... [more]
ARGC_DESRM6.485e-3554.01N-acetyl-gamma-glutamyl-phosphate reductase OS=Des... [more]
ARGC_OLICO2.464e-3452.14N-acetyl-gamma-glutamyl-phosphate reductase OS=Oli... [more]
ARGC_GEOSM2.464e-3452.48N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_STAS13.218e-3452.17N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_GEOUR7.169e-3450.35N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_GEOSF1.597e-3351.77N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_GEOBB2.086e-3351.06N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00739 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00739 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623648 ID=BQ623648; Name=BQ623648; organism=Citrus sinensis; type=EST; length=609bp
GGCATTTATTCTTATGGTGTCACAAGGCATCGTCATGTTCCAGAAATCGA
ACAGGGACTGACTGATGTTGCAAGTTCAAAAGTAACAGTCAGTTTCACTC
CACACCTAATGCCAATGATCCGAGGCATGCAATCAACTATATACGTTGAA
ATGGCTCCAGGAGTGACAATCGAGGATTTATGCCAGCAATTAAAAATCTC
CTATGAGCATGAGGAATTTGTGAAGTTGTTGGAAAAGGGAGTTGTCCCTC
GGACTCACAATGTTCGAGGTTCTAATTACTGTTTGATGAATGTCTTTCCT
GATCGAATTCCTGGAAGAGCAATAATTATATCAGTTATTGATAATCTTGT
GAAGGGAGCATCAGGTCAAGCTCTTCAAAATCTTAACATAATGCTGGGAT
TTCCGGAAAATACTGGGCTTCTATATCAGCCCTTGTTTCCTTAGTTTCTT
TTCTTAATATGTTTAAAGAGTAAGCAGGCATTTTCAACACTAATTAACAA
ATCTCTCTTAGCCTACCCAAAACTCTCTTGAAAATTAGTATATTTCGTCT
ATCGACTATGGAGGCTGTTCAGAAACAGTTCAGGTTACTTTGGGGGAATT
TTGGTTTTC
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