BQ623662

Overview
NameBQ623662
Unique NameBQ623662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length467
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5211 contig Csv1_Contig5211:75..540. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.701e-64
Identity = 98/119 (82.35%), Postives = 107/119 (89.92%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAKGHGE 467
            +C   DAFK AGE+IVFASGSPF NVDLGNGKIGHVNQANNMYLFPGIGLG LLSGAR I+D ML+ AAECLASYM+D+EI +GILYPSID IRDITAEVGAAVLRAAV EDLA+GHG+
Sbjct:  450 ECCPVDAFKLAGEDIVFASGSPFANVDLGNGKIGHVNQANNMYLFPGIGLGALLSGARNISDTMLEAAAECLASYMSDDEINRGILYPSIDDIRDITAEVGAAVLRAAVAEDLAEGHGD 568          

HSP 2 Score: 68.5514 bits (166), Expect = 2.701e-64
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAEMHCC 124
            LSGVGG+F+EEVL+AM+ESDSV+PAIFAMSNPT NAE  CC
Sbjct:  414 LSGVGGIFHEEVLRAMKESDSVRPAIFAMSNPTNNAE--CC 452          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.374e-53
Identity = 83/119 (69.75%), Postives = 103/119 (86.55%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAKGHGE 467
            +CT  +AF   GENI+FASGSPF++VDLGNG +GH NQANNM+LFPGIGLGTLLSG+R ++DGMLQ AAECLA+Y+T+EE+ KGI+YPSI  IRDIT EV AAV++ A+EEDLA+G+ E
Sbjct:  473 ECTPEEAFSILGENIIFASGSPFKDVDLGNGHVGHCNQANNMFLFPGIGLGTLLSGSRIVSDGMLQAAAECLAAYITEEEVLKGIIYPSISRIRDITKEVAAAVVKEAIEEDLAEGYRE 591          

HSP 2 Score: 50.8322 bits (120), Expect = 2.374e-53
Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            LS  GG+F++EVL+A++ S S +PAIF MSNPT NAE
Sbjct:  437 LSACGGLFSKEVLEALKHSTSTRPAIFPMSNPTRNAE 473          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.151e-51
Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAKGH 461
            +CT  +AF   G+++V+ASGSPF++VDLGNGKIGHVNQ NNMYLFPGIGLG LLSG+R I+D M Q AAE LA YMTDEE+  G++YPSI  IRDIT EV AAV++ AVEEDLA+G+
Sbjct:  470 ECTPEEAFSIVGDHVVYASGSPFKDVDLGNGKIGHVNQGNNMYLFPGIGLGVLLSGSRIISDSMFQAAAERLAGYMTDEEVINGVIYPSISRIRDITKEVAAAVIKEAVEEDLAEGY 586          

HSP 2 Score: 53.5286 bits (127), Expect = 2.151e-51
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            LS  GG+F++EVL+A+++S S +PAIFAMSNPT NAE
Sbjct:  434 LSAYGGLFSKEVLEALKDSTSTRPAIFAMSNPTKNAE 470          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.937e-25
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAK 455
            +CTA  A++      +FASGSPF+ V+   GK     Q NNMY+FPG+GL   +  A+ +TD M+  AA+ LAS++ D E+  G +YP +  IR+I+  +   V+  A EE +A+
Sbjct:  406 ECTAEQAYQWTDGRCIFASGSPFKPVEY-KGKTFVPGQGNNMYIFPGLGLAASVCEAKHVTDAMIITAAKTLASFVEDSEVLTGKIYPGLQHIREISTRIAVKVIEKAYEEGMAQ 519          

HSP 2 Score: 42.3578 bits (98), Expect = 1.937e-25
Identity = 20/37 (54.05%), Postives = 28/37 (75.68%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            LSG+GG F++EV++ M +    KP +FA+SNPT NAE
Sbjct:  371 LSGIGGSFSQEVIEEMAKHVE-KPIVFALSNPTTNAE 406          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.945e-24
Identity = 43/119 (36.13%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAKGHGE 467
            +C+A   +K      +FASGSPF+ V L NG+  +  Q NN Y+FPG+ LG +  G R ITD +    AE +A  ++D+ + +G LYP +++IRD++ ++   +++ A +E  A  + E
Sbjct:  414 ECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPE 532          

HSP 2 Score: 38.1206 bits (87), Expect = 5.945e-24
Identity = 18/44 (40.91%), Postives = 28/44 (63.64%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAEMHCC*CF 133
            ++ +GG F+E++LK M   +  +P IFA+SNPT  AE     C+
Sbjct:  379 VAAIGGAFSEQILKDMAAFNE-RPIIFALSNPTSKAECSAEQCY 421          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 8.271e-23
Identity = 40/119 (33.61%), Postives = 72/119 (60.50%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLAKGHGE 467
            +C+A + +K      +FASGSPF+ V L +G+     Q NN Y+FPG+ LG +  G R I D +    AE ++  ++D+ + +G LYP +++IRD++ ++   +++ A +E +A  + E
Sbjct:  414 ECSAEECYKVTKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHINDSVFLTTAEVISQQVSDKHLEEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPE 532          

HSP 2 Score: 37.7354 bits (86), Expect = 8.271e-23
Identity = 18/44 (40.91%), Postives = 27/44 (61.36%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAEMHCC*CF 133
            ++ +GG F E++LK M   +  +P IFA+SNPT  AE     C+
Sbjct:  379 VAAIGGAFTEQILKDMAAFNE-RPIIFALSNPTSKAECSAEECY 421          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.082e-22
Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEV 410
            +CTA DA+       +FASGSPFE V L +G++    Q NN Y+FPG+ L  +L  AR I+D +  +AA+ L + +TD E+ +G LYPS+ +I++++A +
Sbjct:  427 ECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANI 526          

HSP 2 Score: 34.6538 bits (78), Expect = 3.082e-22
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            ++G G +F   V+KAM  S + +P IFA+SNPT  AE
Sbjct:  392 VAGAGPLFTHGVIKAMA-SINERPIIFALSNPTAQAE 427          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.082e-22
Identity = 50/114 (43.86%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +CTA +A+  +  + +FASGSPF+ V+   G+     QANN Y+FPG GLG ++ GA  + D ML  A+E LAS +T E   KG++YP    IR I+A + A V   A E  LA
Sbjct:  447 ECTAEEAYTWSQGHAIFASGSPFDPVEY-EGRTFVPGQANNAYIFPGFGLGLIMCGAIRVHDDMLLAASEALASQVTGEHFIKGLIYPPFKDIRKISAHIAAGVAAKAYELGLA 559          

HSP 2 Score: 32.3426 bits (72), Expect = 3.082e-22
Identity = 17/36 (47.22%), Postives = 24/36 (66.67%), Query Frame = 2
Query:    5 SGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            SG G  F +EV++AM   ++ KP I A+SNPT  +E
Sbjct:  413 SGKGKQFTKEVVEAMANINA-KPLILALSNPTSQSE 447          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.085e-22
Identity = 41/114 (35.96%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAVLRAAVEEDLA 452
            +CTA   +       +FASGSPF+ V L +G+  +  Q NN Y+FPG+ L  +  G R ITD +    AE +A  ++D+ + +G LYP +++IRD++ ++   ++R A +E  A
Sbjct:  400 ECTAERGYTLTQGRAIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALAVVACGLRHITDKIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVRDAYQEKTA 513          

HSP 2 Score: 37.3502 bits (85), Expect = 3.085e-22
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            ++ +GG F+E++LK M   +  +P IFA+SNPT  AE
Sbjct:  365 VAAIGGAFSEQILKDMAAFNE-RPIIFALSNPTSKAE 400          
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.944e-21
Identity = 40/104 (38.46%), Postives = 65/104 (62.50%), Query Frame = 3
Query:  111 KCTAADAFKHAGENIVFASGSPFENVDLGNGKIGHVNQANNMYLFPGIGLGTLLSGARFITDGMLQQAAECLASYMTDEEIPKGILYPSIDSIRDITAEVGAAV 422
            +CTA +A+       +FASGSPF  V L +G++    Q NN+Y+FPG+ L  +L   R I+D +  +AA+ L S +TDEE+ +G LYP + +I++++  +   V
Sbjct:  427 ECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKV 530          

HSP 2 Score: 35.039 bits (79), Expect = 1.944e-21
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 2
Query:    2 LSGVGGVFNEEVLKAMRESDSVKPAIFAMSNPTMNAE 112
            ++G G +F  +V++AM  S + +P IFA+SNPT  AE
Sbjct:  392 VAGAGRLFTPDVIRAMA-SINERPVIFALSNPTAQAE 427          
The following BLAST results are available for this feature:
BLAST of BQ623662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
MAON_SOLTU2.701e-6482.35NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAOM_SOLTU2.374e-5369.75NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOM_AMAHP2.151e-5168.38NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAOX_DICDI1.937e-2540.00NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAOX_HUMAN5.945e-2436.13NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOX_RAT8.271e-2333.61NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOM_MOUSE3.082e-2242.00NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOX_MESCR3.082e-2243.86NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_PIG3.085e-2235.96NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOM_HUMAN1.944e-2138.46NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00753 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00753 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623662 ID=BQ623662; Name=BQ623662; organism=Citrus sinensis; type=EST; length=467bp
TTTGTCTGGCGTAGGTGGTGTCTTCAATGAAGAGGTGCTTAAGGCTATGC
GAGAGTCTGATTCTGTCAAACCTGCCATTTTTGCTATGTCAAATCCGACC
ATGAATGCTGAAATGCACTGCTGCTGATGCTTTTAAGCATGCTGGGGAAA
ATATAGTGTTTGCTAGTGGAAGTCCTTTTGAGAATGTTGATCTGGGAAAT
GGGAAAATAGGCCATGTAAATCAAGCAAATAACATGTATCTGTTCCCTGG
GATTGGTTTGGGAACTCTCCTTTCAGGTGCTCGTTTTATAACAGATGGAA
TGTTACAACAAGCTGCAGAATGCCTTGCGTCCTATATGACCGATGAGGAA
ATTCCAAAAGGCATTCTGTATCCATCTATTGACAGTATTCGAGATATTAC
GGCAGAAGTTGGAGCAGCTGTTCTACGAGCAGCAGTTGAGGAAGACTTGG
CAAAAGGTCATGGTGAA
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